Gene Rleg_4319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4319 
Symbol 
ID8015094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4424964 
End bp4427429 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content66% 
IMG OID644826889 
ProductATP-dependent helicase HrpB 
Protein accessionYP_002978098 
Protein GI241207002 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01970] ATP-dependent helicase HrpB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAATCA GTGCATCCTT GCCGGAGCTT CCGGTTTCAC ATGTCCTGCC GGCCGTCGCC 
TCTGCGCTGG AAAAGCAAAA ACGCGCCGTT CTTTCCGCCC CGCCCGGCGC CGGCAAGACG
ACGCTGGTAC CGCTTTACCT GCTTGGCCAG GCCTGGCGCG GCGATGGCAA GATCATCCTG
CTGGAGCCAC GTCGGCTGGC GGCGCGGGCA GCGGCAAGCC GGATGGCATC GCTCATCGGC
GAACAGGTCG GCGGGACGGT CGGTTACCGC ATGCGCCTCG ACAACAGGAT ATCGGCCGCG
ACACGCATCG AGGTGGTGAC CGAAGGGGTT TTTGCCCGGA TGATCCTCGA CGATCCGGAA
CTGACCGGTG TCTCGGTGGT GATCTTCGAC GAATTCCATG AGCGTTCACT GGACGCAGAC
TTCGGACTCG CTCTGGCGCT CGACGTCCAG TCGGCACTGC GCGACGATCT GCGTATCCTC
GTGATGTCGG CGACCCTCGA CGTCGAACGC GTGGCCGCGC TGCTCGACCA TCCACCTGTC
ATCGAAAGCC TGGGGCGCAG CTTTCCGATC GATATCCGTT ACCAGGATCG GCCGGGCGGC
GAACGCATCG AGGATGCGGT GACGCGGGCG ATACTCGATG CCCATGCCAA TGAGGCCGGC
TCGATTCTCG CCTTCCTGCC CGGCCAGGCG GAAATCACCC GGACCGTGGA ACGCTTGCAG
GGGCGATTCG GAGCCGAGAC GCTGATTGCC CCCCTTTACG GCAATCTCAG CCAGAAGGAG
CAGGATGCGG CGATCCGGCC AGCATACCAG GGGACACGCA AGATCGTGCT TGCGACATCG
ATCGCCGAAA CGTCGATCAC CATCGACGGC GTCAGGATCG TGATCGACAG CGGCTTGCAG
CGTCTGCCGG TGTTCGAGGC GTCGACCGGC ATCACACGGC TGGAGACGGT GCGCGTGTCG
CGGGCTTCCG CCGATCAGCG GGCGGGCCGT GCCGGACGAA CGGAACCGGG CATCGCCGTC
AGGCTGTGGC ACCAGGGACA GACAGCGGCA CTGCCGGCCT TCACCCCGCC GCAGATCCTT
TCCAGCGATC TCTCGGGGCT GGTGCTCGAC CTCGCACATT GGGGCGTTCA AGACCCGGCA
TCGCTTGCCT TCGTCGATCA ACCGCCGGAA ACGACGCTGA GGGAGGCGCG GGTTCTGCTC
GGCCAGCTCG GCGCCCTCGA CAAGGACGGA GCGCTGACAG CGCGTGGCAA GGTGATGCGC
GATCTCGCTT TGCCGCCGCG GCTTGCCGCC ATGGTCGTCT CGGCGGGAGA AGTGGGACAC
GCACGCGATG CGGCGATGAT CGCCGTGCTT CTCACCGAAC AGGGGCTTGG CGGAACGAGT
ATCGATATCG AGGAGCGGCT GCGACGCTTC AAGGCCGAGC GGGGCGAGAG AGCGGAGGCT
TCAAGGCGGC TGGCAGGACG GCTGGCGAGC GGCCTCGACA GCGTTGCCTC AACGGCGCCG
GCGCTTGCCG GCCAGTTGCT GCTGCATGCG TTCCCGGATC GAATAGCGAT TCAGCGCGGC
GGGCGCGGCC GATTCGTGAT GGCGAACGGC CGCGGAGCGG AGCTGCCCGA AACCGAGAGG
CTGGCCGGCA GCCAGATGCT GGTGATTGCC GACCTGACCG GACGGGCGGC GCGGGCGCGA
GTTCTGGCGG CAGCCGAGGT GACACGCGGC GACATCGAAG CCGAGTTGCC CGGTGAGATC
AAAACCGACG ACCAAATATT CTTCGACCGA CAGAGCCGGC AAATCCGGGC GCGGCGGGCA
ACCCGGCTCG GTGCGATTGT CTTCGAAGAG ACGCCTTTGC CGCGCCCGTC CGGGGCAGCA
GTCACCCAGG CGCTGGTGGA CGGGGTACGC GAACTCGGGC TCGATCAGCT TGCCTTCTCG
AAGGAGGCCA TGCAGCTTCG CGAGCGGATT GGATTCCTTC ACCGGACGAT CGGCGAGCCC
TGGCCCGATG TCGGCGATGA TGCCCTGCTT TCCCGGTTGG ACGAGTGGTT CGCACCCTTT
CAGACCGAGG CCCGCGGCCT TTCCGAGATT TCCGCAGCCG GGCTTTCGAA CGGGCTGATG
TCGCTGGTAC CGCATGAGCT GCAACGCGAC CTTAGCCGGC TTGCGCCAAC CCATTTCGAA
GCGCCGACCG GCCAAAGGCA TCCGATCCAG TATGAGGGCG AGGAGCCGGT GCTGACGATC
CGCGTACAGG AGCTGTTTGG ACTGAGGCAG CATCCTGCCA TTGCCGGTGG CCGCCTGCCG
CTGCTGCTCG AGCTCACCTC GCCGGCGCAC CGGCCGATCC AGACGACACG CGACCTGCCG
GGCTTCTGGG CCGGCTCGTG GAGGGATGTG CGTGCTGATA TGCGCGGGCG CTATCCCCGG
CATCCCTGGC CGGAGCGGCC GGAGGATGCG TTGCCGACGA CACGGGCAAA ACCGCGTGGT
ACATGA
 
Protein sequence
MTISASLPEL PVSHVLPAVA SALEKQKRAV LSAPPGAGKT TLVPLYLLGQ AWRGDGKIIL 
LEPRRLAARA AASRMASLIG EQVGGTVGYR MRLDNRISAA TRIEVVTEGV FARMILDDPE
LTGVSVVIFD EFHERSLDAD FGLALALDVQ SALRDDLRIL VMSATLDVER VAALLDHPPV
IESLGRSFPI DIRYQDRPGG ERIEDAVTRA ILDAHANEAG SILAFLPGQA EITRTVERLQ
GRFGAETLIA PLYGNLSQKE QDAAIRPAYQ GTRKIVLATS IAETSITIDG VRIVIDSGLQ
RLPVFEASTG ITRLETVRVS RASADQRAGR AGRTEPGIAV RLWHQGQTAA LPAFTPPQIL
SSDLSGLVLD LAHWGVQDPA SLAFVDQPPE TTLREARVLL GQLGALDKDG ALTARGKVMR
DLALPPRLAA MVVSAGEVGH ARDAAMIAVL LTEQGLGGTS IDIEERLRRF KAERGERAEA
SRRLAGRLAS GLDSVASTAP ALAGQLLLHA FPDRIAIQRG GRGRFVMANG RGAELPETER
LAGSQMLVIA DLTGRAARAR VLAAAEVTRG DIEAELPGEI KTDDQIFFDR QSRQIRARRA
TRLGAIVFEE TPLPRPSGAA VTQALVDGVR ELGLDQLAFS KEAMQLRERI GFLHRTIGEP
WPDVGDDALL SRLDEWFAPF QTEARGLSEI SAAGLSNGLM SLVPHELQRD LSRLAPTHFE
APTGQRHPIQ YEGEEPVLTI RVQELFGLRQ HPAIAGGRLP LLLELTSPAH RPIQTTRDLP
GFWAGSWRDV RADMRGRYPR HPWPERPEDA LPTTRAKPRG T