| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4287 |
|---|
| Symbol | |
|---|
| ID | 8015065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4391774 |
|---|
| End bp | 4394968 |
|---|
| Gene Length | 3195 bp |
|---|
| Protein Length | 1064 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644826857 |
|---|
| Product | double-strand break repair protein AddB |
|---|
| Protein accession | YP_002978066 |
|---|
| Protein GI | 241206970 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3893] Inactivated superfamily I helicase |
|---|
| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.235496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.271483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGC GGCACCAGCC ACGCATCGTG ACGATCCCCG CAGGCCTCTC CTTCCTGAAA
ACGCTGGCGA CGACACTTTG CGACGGCCGA TTGACGCCGA TTTTCCGGCA CGACGCCGAT
GATCCGCTAT CGCTTGCCAA AGTCACGATC TACCTGCCGA CCCGGCGCGC CGTGCGTGTG
CTGCGTTCCG AATTCGTCGA CCTGCTCGGC GGCCGCTCGG CGATCCTCCC CATGATCCGC
CCGCTCGGCG AAACCGATGA CGATAGCGGC TATTTCGACG AGGCGCTGCC GGCAACGATC
GATCTCGCCC AGCCACTGTC GAATACCGCC CGTCTGCTGG AGCTTGCGCG CCTGATCCTC
GCCTGGCGAA ACAAGCTGCC GGAGATCGTC CGCCACATCC ACTCGGACTC GCCGCTCGTC
GCGCCGGCAA GCCCGGCGGA TGCGATCTGG CTCGCCCGCA ATCTTGCGGA ATTGATCGAT
TCCATCGAGA CCGAGGATCT TGACTGGTCG GAGCTGTCGA AACTCGATAC CGGCGATTAT
GCCGCCTGGT GGCAGTTGAC GGCGGAGTTC CTGCAGATCG CCAGCGCCTT CTGGCCCGAG
CGGCTGGCCG AACTCGGCAA ATCCTCGCCG GCGCGGCACA GAAACGCCAT TCTCCGGGCC
GAAGCAAGCC GGCTTTCGGC GACGAAACCC GCCGGGCCGA TCATCATCGC CGGTTCGACG
GGTTCCGTTC CCGCCACCGC CGATCTCATT GCCGCCGTCG CCCATCTGCC GGAAGGCGTG
ATCGTGCTTC CAGGTCTCGA TCTCTCCATG CCCGAAAGGC ACTGGCAGAT GGTCGCGCCG
GAACCGGCGC CCGGCCAACA TGCCAATCCG GCAAGCCGGA GCCATCCGCA GTATGGTCTG
TCTTCGCTGC TCAAGCGGCT GAAGCTGACG CGGGCCGACC TCACGCTCCT CGACAGACCG
GAGGCCGATC TTGAGCGGCG TGCCGAAATC CTGTCGCAGG CCCTTGCTCC GGCGGAGGCG
ACCAGTGACT GGGGAGCTTG GAAAACCGAC CTGCCGGCAG GCGCGCTGTC TTCGTCCTTC
TCTGATGTCT CGCTGATTGA AGCCGCCAAT GAGCGCGAGG AAGCAACCGC GATTGCCATC
GCGCTCCGGC TGGCGCTGGA AAGACCGGGA CAGGACAGCG AGAGCCGGGC AGCACTCATA
ACCCCGGATC GCAATCTTGC GCGGCGGGTG ATGGCCGAGC TTTCCCGCTT CGGCATCCTC
GCCGACGATT CGGCCGGTAC GCCGCTTTCG GCCATGCCGC AGGGCACCTT GCTGCAATTG
CTGCTGGAGG CAGCGCTGCG GCCGGGCGAT CCGGTGGCGA TCATCTCGCT GCTCAAACAT
CCGCTTGCCC GCTTCGGCCT GGAACGCGGC GCATTGATTT CCGCTACCGA GGCGCTCGAG
CTGCTGGCAC TGCGCGGTGG CGTGGCAGAG GTGGATATCA GCACGCTGGA ACCGCTGCTC
GCTCACCAAC TTGCCGAACA GGCCCTGGAC AGGCACGCGC CGCAATGGCG AAAAGCGCTT
TCGCCCGAGG CCGCCGACGC CGCATACGAC CTTGCCCGGC GGGTGACACA AGCGACCGAG
CCTCTGGCTT CGGCGCTGAT GCGGGAGCGG CCGGAAGATC GTGGAAGAAC AGCGCGCTTC
ACATTGTCGG AATGGGCGAA GCGCACCGGC CGTTCGCTTG AAGCGGTCGC GGTTGATCCG
CACGGCAATC TCGCCGATCT CTGGTCGAAC GAAGCGGGAG ACGCCCTCGC CGCCCTGCTT
GGTGAAGTGA TCGACACGGA CGGCCAGATG GAGGCCGACG GACCGCAATG GATCGACATC
ATGGCAGCCC TTGCCGCCGG TCATGCGGTG AAGCCACGGG CGCTCAGCCA TCCGAGGCTC
TTCATCTTCG GCACGCTGGA AGCCCGCCTG CAGAGCGTCG ATACGTTGAT CCTCGGCGGC
CTGAACGAAG GCACGTGGCC GGGACAGACC GCCAATAATC CCTTCATTCC GCGCATGATG
AAGACGGAGA TCGGCCTCGA GCCTCCGGAG CGGCGCATCG GCCAGCTGGC GCATGATTTC
GAGATGGCAA ACGGTACGCG CCATCTGATC TATTCGCGCG CGCTGCGCCA GGGCTCAACG
CCAACCGTCG CCTCGCGTTG GCTGCAGCGG CTGCTGGCGC TCGGCGGAGA GGCGTTCGAA
GCGGAATTGA AGGGACGCGG TAATCGGTTC CTCCAATGGG CCGCTCTCAT CGATCGAGGA
GATGCTCAGG CGCCGGCGCA GCGCCCCTCG CCGAAACCGC CGCTGGCGCT GCAGCCGAAA
TCCTATTCCT TCAGTGAAGT CGGCCGGCTG CGCCGAGATC CCTATGCCAT CTATGCCCGC
CGTGTGTTGC GGCTCGACCC GGTCGAGCCG TTCAATCGCG ATCCAGGGGC CGCCGAACGC
GGAACGCTCT ACCACAAGAT CATCGACCGT TTCATCCGCG AAGCCCATAT CGCCGGCACG
CCGGATGCGG CAGCAGCGAT GGAGGCCATC CTTTCAGAGC TTTTCGACAT GGAAAAATTG
CCGCCGCATA TCGATGCCGT GTGGCGGCCG CGCTTTCGCG CGGTGGCCCG CGCCTTCCTT
GAATGGGAGG CTGGACGCCG GCATGGCATC CTGAAAACGC TGACGGAAGT ACGGGGCGGC
ATGGAGCTGG AGCCGATCAA TATCCGGCTC ACCGGCGTCG CAGACCGGAT CGACGTCACG
GGGCCACACT CGGCCGATAT CATCGACTAC AAGACCGGCT TCAATCCCTC GCCGGCGCAG
GCACGCGTGC TTCTCGATCC ACAGCTTGCG CTTGAAGCGG CCGCCTTGAG CGCCGGTGCC
TTCCGCGATG CCGGCAGCCT CATGCCGCAG GACCTTCTCT ATGTGCGTCT GCGTCCGGGA
AGCCGCTTCC AGGTCGATAC CGTCAACAAT GAGAGTTCTG CCCGCAGCGA CAAGGCGAAA
TCGGCGATGG ATCTCGCCGC CGAATCGATC GACCAGCTGG TCAAATTCGT GGGGTTGCTG
CAATCCAACG AAAGAGGCTT TACCTCGCGG CTGATCCCGG CCCAGCAATT CGATTTCGGC
GGCGACTACG ATCATCTCGC CCGCGTTTCC GAATGGTCGA CGGCCGAAAC CGAAGAGGGC
GGCGGCGATG AGTGA
|
|---|
| Protein sequence | MAERHQPRIV TIPAGLSFLK TLATTLCDGR LTPIFRHDAD DPLSLAKVTI YLPTRRAVRV
LRSEFVDLLG GRSAILPMIR PLGETDDDSG YFDEALPATI DLAQPLSNTA RLLELARLIL
AWRNKLPEIV RHIHSDSPLV APASPADAIW LARNLAELID SIETEDLDWS ELSKLDTGDY
AAWWQLTAEF LQIASAFWPE RLAELGKSSP ARHRNAILRA EASRLSATKP AGPIIIAGST
GSVPATADLI AAVAHLPEGV IVLPGLDLSM PERHWQMVAP EPAPGQHANP ASRSHPQYGL
SSLLKRLKLT RADLTLLDRP EADLERRAEI LSQALAPAEA TSDWGAWKTD LPAGALSSSF
SDVSLIEAAN EREEATAIAI ALRLALERPG QDSESRAALI TPDRNLARRV MAELSRFGIL
ADDSAGTPLS AMPQGTLLQL LLEAALRPGD PVAIISLLKH PLARFGLERG ALISATEALE
LLALRGGVAE VDISTLEPLL AHQLAEQALD RHAPQWRKAL SPEAADAAYD LARRVTQATE
PLASALMRER PEDRGRTARF TLSEWAKRTG RSLEAVAVDP HGNLADLWSN EAGDALAALL
GEVIDTDGQM EADGPQWIDI MAALAAGHAV KPRALSHPRL FIFGTLEARL QSVDTLILGG
LNEGTWPGQT ANNPFIPRMM KTEIGLEPPE RRIGQLAHDF EMANGTRHLI YSRALRQGST
PTVASRWLQR LLALGGEAFE AELKGRGNRF LQWAALIDRG DAQAPAQRPS PKPPLALQPK
SYSFSEVGRL RRDPYAIYAR RVLRLDPVEP FNRDPGAAER GTLYHKIIDR FIREAHIAGT
PDAAAAMEAI LSELFDMEKL PPHIDAVWRP RFRAVARAFL EWEAGRRHGI LKTLTEVRGG
MELEPINIRL TGVADRIDVT GPHSADIIDY KTGFNPSPAQ ARVLLDPQLA LEAAALSAGA
FRDAGSLMPQ DLLYVRLRPG SRFQVDTVNN ESSARSDKAK SAMDLAAESI DQLVKFVGLL
QSNERGFTSR LIPAQQFDFG GDYDHLARVS EWSTAETEEG GGDE
|
|---|
| |