| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4257 |
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| Symbol | trmE |
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| ID | 8015037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4361269 |
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| End bp | 4362582 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644826827 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002978036 |
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| Protein GI | 241206940 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.910878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAATG ATACCATATA TGCGCTATCG AGCGGTGCCC TGCCGTCGGG TGTTTCGGTC
GTTCGCATCA GCGGGCCGCT GACCAGAGAC ATATTGGTAA GCCTCGCCGG ATCCGTCTCG
GCAGCCCGGC ATGCATCTCA CCGAACGATT CGGAGTCGTA ACAATCAGCC GATCGATAGC
GGCTTGGTGC TGTTTTTCCC TGCTCCGAAT TCGTTTACCG GCGAGGATGT TGCCGAGCTG
CAGATCCACG GCAGCAAAGC CGTACTTGCG GCGCTGTTTC ACGCACTTGG CGATATTCCG
GGTGTTCGGA TGGCGGTCGA GGGCGAATTC TCCCGCCGAG CTTTCGAGAA CGGCAAACTT
GATCTTGTAG AGGTTGAGGG CCTGGCCGAC CTTATCGGCG CCGAGACCGA GATGCAGAGA
CGCCTTGCGG TCGAACATAG CGCAGGCGGA CTCTCCAGAA TTTACGATTC GTGGGCGGAA
CGATTAACGC GCGCCCGGGC GCTGATCGAG GCGGAGCTTG ATTTCCCCGA TGAGGATGAT
GTTCCAGGCT CGGTATCGGA TATGGTCTGG GCCGATATGG CGAAGCTTCG CAGTGATATC
GAGAATCACC TGGCGACAGC TTCTGCCGGG GAGATTATCA GAGACGGCTT CAAGGTGGTC
ATCGCCGGCG CTCCGAATGC TGGAAAATCG AGCCTGTTGA ACACTTTGGC GCGTCGAGAC
GTGGCAATCG TGACAGAGAT CGCCGGAACC ACCCGTGATG TCCTGCAGGT TGATCTCGAT
ATTGATGGTT ACCTGATCAA GCTCTATGAC ACCGCGGGCC TTCGCGAGGC GGACGACAGG
GTCGAGATGG AAGGAGTGCG GCGCGCGCGC GCGGCGCTTC GTGATGCCGA TCTTGTCCTG
CTGCTGGTTG ACATGACTAA TCCTCTGGTT CCCGACGAGT TGGAGCAAGC CTCGCCACAT
GTTATTGTCG GGACGAAGAA GGATCTCATC GGCATTGCCG AGGATCGGTA CGACTTGCAG
ATTTCGACAA CGACCGGTGA CGGCCTGCCG GAATTGCGCC GATTGATCGG CGACATCATC
GACAAACGTT TTGCTGGTCT GTCTATGGCA ATTCCCAGCC GACAACGGCA TAAGGATTCT
CTGGCGAAAT GTTTAGCGGC ACTCGATGCG GCGATATCGC AGACAGATGT GAATCTCGAA
CTGCGGACTG AGCAGCTGCG AATTGCCGCT GAGTATTTGG GCAGAATTAC TGGACGAGTC
GATGTTGAGC AGCTGCTCGG CGTGATCTTC TCAGAATTTT GTATCGGCAA ATGA
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| Protein sequence | MLNDTIYALS SGALPSGVSV VRISGPLTRD ILVSLAGSVS AARHASHRTI RSRNNQPIDS
GLVLFFPAPN SFTGEDVAEL QIHGSKAVLA ALFHALGDIP GVRMAVEGEF SRRAFENGKL
DLVEVEGLAD LIGAETEMQR RLAVEHSAGG LSRIYDSWAE RLTRARALIE AELDFPDEDD
VPGSVSDMVW ADMAKLRSDI ENHLATASAG EIIRDGFKVV IAGAPNAGKS SLLNTLARRD
VAIVTEIAGT TRDVLQVDLD IDGYLIKLYD TAGLREADDR VEMEGVRRAR AALRDADLVL
LLVDMTNPLV PDELEQASPH VIVGTKKDLI GIAEDRYDLQ ISTTTGDGLP ELRRLIGDII
DKRFAGLSMA IPSRQRHKDS LAKCLAALDA AISQTDVNLE LRTEQLRIAA EYLGRITGRV
DVEQLLGVIF SEFCIGK
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