Gene Rleg_4243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4243 
Symbol 
ID8015026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4344164 
End bp4345126 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID644826813 
Productheat shock protein HtpX 
Protein accessionYP_002978022 
Protein GI241206926 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.123521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG TTCGCACTGC CATGTTGCTT GCCTTCATGA CGGCGCTTTT CATGTTTGTC 
GGCTTCCTGA TCGGCGGTCG GGCCGGCATG ATGATCGCGT TCGTCATTGC CGCCGGCATG
AATTTCTTCT CCTACTGGAA TTCCGACCGC ATGGTGCTTT CGGCCTATCG CGCGCAGGAG
GTCGACGAGC GCAACGCGCC GGAATTCTTC CGGATCGTGC GCGATCTCGC CCGCAATGCC
GGCCTGCCGA TGCCGAAGGT CTATCTCTAC GACAGCCCTC AGCCGAATGC CTTCGCCACC
GGCCGCAATC CCGACAATGC CGCCGTCGCT GCCTCGACCG GCCTGCTCAG CGCCTTGTCT
GCCGAGGAGG TCGCAGGCGT GATGGCGCAT GAACTGGCCC ACATTCAGAA CCGCGACACG
CTGACGATGA CGATTACGGC AACGCTTGCC GGTGCGATCT CCATGCTCGG CAACTTCGCC
TTCTTCTTCG GCGGCAACCG TGAGAACAAC AGCAATCCCC TTGGCTTCGT CGGCGTCATC
GTCGCGATGA TCGTGGCGCC GCTTGCCGCC ATGCTGGTGC AGATGGCGAT CAGCCGCACG
CGCGAATATT CGGCCGACCG CCGCGGCGCC GAGATCTGCG GCAATCCGCT CTGGCTCGCT
TCGGCGCTCG GCAAGATCGC GCGCGGCGCT GCCCACGTGC CGAACGAAGA CGCCGAGCGC
AATCCGGCAA CGGCGCATAT GTTCATCATC AATCCGCTCT CCGGCGAGCG CATGGACAAT
CTGTTTTCCA CACATCCGAA CACGGAAAAC CGCATCGCTG CGCTGCACGA CATGGCGCAA
AGCGGCATGA ATGTCTCGAC GTCGCCGGCT CGTGCTGCTA ATCCGTCGCG CAAATCGCGC
TCTGTTCCGG ATACGGGTCT TGGTCGCGGT GGTTCGCAAC CGCCAAAAGG TCCGTGGTCT
TGA
 
Protein sequence
MNLVRTAMLL AFMTALFMFV GFLIGGRAGM MIAFVIAAGM NFFSYWNSDR MVLSAYRAQE 
VDERNAPEFF RIVRDLARNA GLPMPKVYLY DSPQPNAFAT GRNPDNAAVA ASTGLLSALS
AEEVAGVMAH ELAHIQNRDT LTMTITATLA GAISMLGNFA FFFGGNRENN SNPLGFVGVI
VAMIVAPLAA MLVQMAISRT REYSADRRGA EICGNPLWLA SALGKIARGA AHVPNEDAER
NPATAHMFII NPLSGERMDN LFSTHPNTEN RIAALHDMAQ SGMNVSTSPA RAANPSRKSR
SVPDTGLGRG GSQPPKGPWS