| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4234 |
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| Symbol | |
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| ID | 8015017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4329249 |
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| End bp | 4330868 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826804 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002978013 |
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| Protein GI | 241206917 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.256126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG AAACCATTAA AAAGGTTATC CTGGCCGCCA TCATGCTGCC CTTCGTCTTC
ATGCTCATTG AAGGCGTCGT CGTCATACGT TCTTCGGTCA ATCATTACTG GAACCTCGAA
AAGGACCGGC AGTTCGCCGA TGTGCTTGCC CGTGGCGGGT CGATCGCCGC CACGGAGATT
CTGACTGAAA TTGGCGCCAC CCGCCGCTAC CTCGCAGATC CCAGCGACAT GACTGCTATC
GACATGCAGC AAAGCCGGGT GACGCTCGAT CGCGAACGCC GCGCTTTTTA TGCCAGCCTG
CCCTCCCGCG AGGCGCTCGA CGAGGGGCTC GTCGGCGAAT TATCGATTCT CAGCCTTGCC
TACAGCCGTA TCGTCGCGGC GCGCAGCGCC GTCGACCAGG GCCGTTATGC CGGCAGCGAT
CCCGGTTCCA TTTACTGGTA TGCGGCTCTC AAGCAGCTTG CCGTCGTCGA TGCGCTTTCA
CCGCTGATCA GCGATCCGGT GCTGCTTGAG AAATCCAACC AGCTGATGGG CATCCTGCTG
ACCTATTACG GCGAAAGGCT GATCACCGGG ATCGGCACCC GTTATCTCAA CCAGGGGGTT
TCCGCCAGAT TGCCGGTCGA GCTCTTCGTG CAGGGCAAGG TCATGCTCGG CGAGGGCATG
GATCACATGG TTTTCCATTC CTCCGCGCCG GTCGTGCGCA ACATCGTCGC TTATCTTGGC
AGCGCCAGCC AGGTAAAGGC GAATGCGATC ACCGATGCCA TTCTCGCCGG AGCGCGGCCG
ACACGCGCGG TGCATGACGT CTGGGCCGCC GCGCAGAGCG AGCGCATGAG CTTCCTGCAG
CAGAGGATGA TCGAGGCCGC ACAGGATATT CACGAGACCG GCGAAAACCT GTCGACGCGC
TCGCACATAC ACCTGACGCG GATCCTGGCG CTGTGTGCCG GCCTGCTGAT TCTCGCCACA
TTGGTGCTGC TGCTGGCGGC AAAGGGCCTT CGCCTGATCG ACCGACTGAC CCAGGATCGG
GAGACGCTGG TCGGCGAGCT GCGCAGCGCC GCCCAGACCG ATCTTCTGAC CGGGCTTTAC
AACAGGCGCG GCTTCGAGGT CGCCGCATCC GCACTTCTCA CACAGGCCGA GCACGGATCA
CGCTGGATTT CCGTCGTGCT CTTCGACCTC GATCATTTCA AGAAGATCAA CGACGTTCAC
GGGCATGACG CCGGCGATGC TGTGCTCCGG CATGTCGCGG GCGTCGCGCG TAAGAATTTT
CGTTCCTTCG ATCTGCTGGT GCGCCATGGC GGCGAGGAGT TCCTGGCGCT TCTGCCGGAT
TCGACGCCTG ACGATGCTGC AATCGTTGCC GAGCGTGTGC GGCTGGCGAT CGAGGCGGCG
GAAATCCCCC TGCCGAGCGG CGATGTTCTC AAGGTGACGG CAAGTTTCGG ATGCGCCGGA
CGGGCAAATG AAGCCACCAA CCGGAACTTC GAGGATCTGG TCAAACGCGC CGACCTGGCG
CTTTACGCCG CCAAGGCCTC CGGCCGCAAC TGCGTCGTCT CGGGACCGAC CCTGCCGGCC
CCGGCCCAGG AGGAGCGACG CAAGGCGGTG TCGGGCGGTG GCTTTGATTC CCGCATATGA
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| Protein sequence | MKFETIKKVI LAAIMLPFVF MLIEGVVVIR SSVNHYWNLE KDRQFADVLA RGGSIAATEI
LTEIGATRRY LADPSDMTAI DMQQSRVTLD RERRAFYASL PSREALDEGL VGELSILSLA
YSRIVAARSA VDQGRYAGSD PGSIYWYAAL KQLAVVDALS PLISDPVLLE KSNQLMGILL
TYYGERLITG IGTRYLNQGV SARLPVELFV QGKVMLGEGM DHMVFHSSAP VVRNIVAYLG
SASQVKANAI TDAILAGARP TRAVHDVWAA AQSERMSFLQ QRMIEAAQDI HETGENLSTR
SHIHLTRILA LCAGLLILAT LVLLLAAKGL RLIDRLTQDR ETLVGELRSA AQTDLLTGLY
NRRGFEVAAS ALLTQAEHGS RWISVVLFDL DHFKKINDVH GHDAGDAVLR HVAGVARKNF
RSFDLLVRHG GEEFLALLPD STPDDAAIVA ERVRLAIEAA EIPLPSGDVL KVTASFGCAG
RANEATNRNF EDLVKRADLA LYAAKASGRN CVVSGPTLPA PAQEERRKAV SGGGFDSRI
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