| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4223 |
|---|
| Symbol | |
|---|
| ID | 8015009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4316868 |
|---|
| End bp | 4317800 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644826793 |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_002978002 |
|---|
| Protein GI | 241206906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.249037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTCG TACCTCTCCA TCTCGACACG CCCTTGGTTC AGACGGCACC TGGCTATAGC
GCCAGCGGCA AACCTCTCTG GCTGAAGCTC GATGCTCTGC AGCCTTCCGG CAGCTTCAAG
CTGCGCGGCG TCGGCCGGCT TTGCCAGCAC GAGGTGGAAA ATGGGGCGCG CGAGATCTTC
TGCGCTTCCG GCGGCAATGC CGGCATTGCC GCGGCTTATG CCGGCCGGGC GCTCGGTGTG
CCGGTCACGA TCGTCGTGCC GGAGACGACG GCGGCCGATG TCCGGCAGAC GATTGCCGCA
ACGGGTGCGA ATGTCCTCGT TCATGGTTCG GTTTTCGATG AGGCCAATGC TCATGCAGTC
GAACTCGCCC GGAGCCGCAA GGCAACCTAT GTTCACCCCT TCGACCATCC GCTTCTGTGG
GATGGCCATG CCACGCTGAT CGACGAGGTG GTGGCGAAGG GGGCAAAATT CGATTGCGTC
ATCACCAGCG TCGGTGGCGG CGGGCTGCTT GCCGGCATTG TCGAGGGATT GAAGCGCAAC
GGGCTTTCCG ATGTGCCTGT TATCGCCGTC GAAACGGAGG GGGCGGCCTC GCTGAACGCC
AGCCTCAAGG CGAATGAGCG TATCACCCTT CCCGCCATTA CTTCGATTGC CAATTCGCTC
GGGGCGCGGC AGGTGGCGCA GCATGTCTTC GACTTGCCGA AGCAGCATCC GATCGAAAGT
GTTGTCGTCA GCGACGCCGA TGCCGTTGCC GCCTGCCTGA AATTTGCTGA TGCGCAGCGC
ATTCTGGTCG AGCCGGCTTG CGGTGCGGCC CTTGCGGTTG CCGATGTACA TGCCGGGCTG
CTTCAGCGCT TCGATAATCC GCTTATCGAA GTCTGCGGCG GCATCGGCGT GTCGCTCGAA
AAACTCAGGG GCTGGAAAGA AAAATTTCTT TGA
|
|---|
| Protein sequence | MPFVPLHLDT PLVQTAPGYS ASGKPLWLKL DALQPSGSFK LRGVGRLCQH EVENGAREIF
CASGGNAGIA AAYAGRALGV PVTIVVPETT AADVRQTIAA TGANVLVHGS VFDEANAHAV
ELARSRKATY VHPFDHPLLW DGHATLIDEV VAKGAKFDCV ITSVGGGGLL AGIVEGLKRN
GLSDVPVIAV ETEGAASLNA SLKANERITL PAITSIANSL GARQVAQHVF DLPKQHPIES
VVVSDADAVA ACLKFADAQR ILVEPACGAA LAVADVHAGL LQRFDNPLIE VCGGIGVSLE
KLRGWKEKFL
|
|---|
| |