| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4219 |
|---|
| Symbol | |
|---|
| ID | 8015005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4314222 |
|---|
| End bp | 4315157 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644826789 |
|---|
| Product | Citrate (pro-3S)-lyase |
|---|
| Protein accession | YP_002977998 |
|---|
| Protein GI | 241206902 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.114392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAA ACCCCACGAC CCGCTCCATG CGCCTGCGCC GTTCGGTGCT GAGCGTGCCT
GCCATCAATC CCCGCGCCCT CGAAAAAACC CATGCGGTCG ATTGCGATGC GGTGATCTTC
GATCTCGAGG ATTCCGTGGC GCCGGAAAAG AAGGCGGAAG CGCGGGAAAA CCTGAGGAAT
TTCTTTTCGG CTCGACCGCT CGAAGGCAAG GAGCGGATCA TCCGTATCAA CAGCCTGTCC
ACCGATTTCG GCCTGGCGGA CATGGAGCTG GTGACGGCGC TTGCTCCTGA TGCCGTGCTG
CTGCCGAAGG TCGACGAACC GCAGGATGTC ATGGCGCTCA GTGACTTTCT CTCCGAGGCG
GATGCGCCGG AAGATCTGCG CATCTGGGCG ATGATCGAGA CGCCGCGCGG CATCCTCAAT
GCGGCTGTTA TCACCGAAGC CGGGCGCACG CCGGGCTCGC GGCTCGATTG CCTGGTCGTC
GGGCTCAACG ACCTGCGCAA GGAAACCGGC GTGCTTCCAC AGCCAGGGAG GAACTATCTC
GTGCCGTGGC TGATGCAGGT CGTCCTTGCT GTCAGCGCCT ACGGGCTCGA TGCGATCGAC
AGCGTCTTCA ACGATTTCAG GGACGAACAG GGTTTTGATG CCGAATGTCT GCAGGGCCGG
GCCATGGGCT TTGCCGGCAA GATGCTGATC CATCCGGCGC AGATCGAGCC CGCCAACCGC
CATTTCGGTC CGGATCCGGC AGCGATTGCG GAAGCGGAGG CGATCATGTC AGCCTTTGCC
GACCCCGCTT CCGATGGGCT GAACGTCATC AATGCAGGCG GGCGGATGGT CGAGCGGCTG
CATCTTGTCC AGGCGGAAAG TCTGGTCCAT AAAGCCCGCC TGATCGCAGC CCGCCTGATC
GCAGCCCGCC AGGCTGCAGC ACGAAAGACG ATGTGA
|
|---|
| Protein sequence | MSRNPTTRSM RLRRSVLSVP AINPRALEKT HAVDCDAVIF DLEDSVAPEK KAEARENLRN
FFSARPLEGK ERIIRINSLS TDFGLADMEL VTALAPDAVL LPKVDEPQDV MALSDFLSEA
DAPEDLRIWA MIETPRGILN AAVITEAGRT PGSRLDCLVV GLNDLRKETG VLPQPGRNYL
VPWLMQVVLA VSAYGLDAID SVFNDFRDEQ GFDAECLQGR AMGFAGKMLI HPAQIEPANR
HFGPDPAAIA EAEAIMSAFA DPASDGLNVI NAGGRMVERL HLVQAESLVH KARLIAARLI
AARQAAARKT M
|
|---|
| |