| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4214 |
|---|
| Symbol | |
|---|
| ID | 8015000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4307451 |
|---|
| End bp | 4310915 |
|---|
| Gene Length | 3465 bp |
|---|
| Protein Length | 1154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644826785 |
|---|
| Product | DNA polymerase III, alpha subunit |
|---|
| Protein accession | YP_002977994 |
|---|
| Protein GI | 241206898 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0746067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCG CGCGCGCACT CTTCGAGATC GGCACAAGGA CGAATTTCTC GTTTCTTGAA
GGCGCCTCCG GCCCGGAGGA GATGGTCGTG CAGGCTGCTC GTCTACGGCT CGGCGGTCTC
GGGATTGCGG ACCGGAATTC GGTTGCCGGC GTGGTGCGGG CGCATGCGCA GGCGGAGCAG
CTTGAGGAGA GATACAAGAA CAAGGATGCG ATTCTGGCCC AAGCGAAGAA GGAAGGAAAA
AAGGAGGAGA TCCTCGATCC TATCCGGATT CAGCCGGGCG CCCGTCTCGT CTTTTCCGAT
GGAACGCCTG ATATCCTCGC CTATCCCCGG AGCCGGCGAG GCTGGGCGAA CCTTTGCCGT
CTTCTGAGCG CCGGCAATCT GAAGGAGGAA GCGGTCAAGG GAAGCTGCAT TCTGACGGAA
GCGGAACTCA TGGAATGGGG GGACGAGATG ATGCTTGCTC TCGTTCCCGA TCGCACCCTT
GTCGGTCATC AGGCGGGTCA GCCGACGCTG GAAGATTACC TGGAACGGTT TCGCAGGCGC
TTCCGCAAGG CTTTTTATAT GGCGCTGGCG CCAGCCTATG ATGGCCGCGA CAGGCAGGTC
TTTGCGGTGC TTGCCATGCT TGCCGCTCGA AACCGTGTGC CGCTGATTGC AACCAACCAG
CCGCTTTACC ATCATCCTGA ACGCCGGCCG CTTTCGGATG TCGTGATCGC GATCCGGGAG
CATGTGCAGA TATCGCAAGC CGGGTTCCTG CTGGCGCCGA ATGCTGAACG TTACCTCAAG
GATTCACGTG AAATGGCCCG GATCTTCCGG GAGTATCCTA ATGCGATCGA GAATACGCAG
ACATTCTTCG ACAGGCTGAC CTTTTCGCTG AAGGAACTGG AGCACAATTA TCCGCCGGAA
AACGATCCTG GTGAAACGCC GCAGGAGACT CTCGAAAGGC TGACGAGAGC GGGAGCCGCA
AGACGCTATC CCAAGGGTAT CCCGCCCAAG GTGGCGCCAC AGATCGAGTA TGAACTCGAT
CTCATTAAAA AAAAGAAATA TGCCTCTTAT TTCCTGACGG TTCACAGGAT TATCCAGCAC
GCCCGCTATG AACTTAAGGT CTTGTGTCAG GGGCGCGGAT CGGCGGCAAA TTCGGTCATC
TGCTATTGCC TCGAGATAAC GGAAGTCAAT CCTGAAAAGA GTACGCTTCT CTTCGATCGC
TTCATTTCGA TGGACCGGGA CGAGCCGCCG GATATCGATG TCGATTTCGA GCATGACCGG
CGTGAAGAGG TCATCCAGTT CATCTATAAA AGATACGGCA TAGAACATGC TGGGCTGACG
GCGGGGGTGA CCACCTACCG TACGCGCTCG GCGGGCCGCG AGGTCTCCAA GGCCTTTGGG
CTGTCGGAGG ATGTCCAGTC GGCGATCAGC AGCCTCGTCT GGGGCTGGTC GGAGGATAAT
CTCTTGGAGC GGGACGCGAA GGCGGCGGGT CTCGACATCA AGGATCCGGT GACCCGAAAC
GTTCTTCAGT ATGCGACCGA ACTTCTCGGC TTCCCGCGCC ACCTCACCCA GCATGTCGGC
GGCTTCGTCA TCACGCGCGA TAGGCTCGAC GAGGTGGTAC CGATCATGAA GACGGCGATG
CCGGATCGCT ACATGATTGA GTGGGACAAG GACGACCTCG ATAACGTCAA GATCCTCAAG
GTGGATGTGC TGGCGCTCGG CATGCTGACC TGCCTGCGGA AGGCCTTCTC GCTGCTTGAA
TTGCATTACG ACGTGAAGAA GACGCTCGCA GACCTCGGCA ACAAGGAGCA TGGGGATGAA
GGCGAGCCGG TTTACGAGAT GATGGGCCGG GCCGATACGC TCGGCGTCTT CCAGATCGAA
AGCCGGGCGC AGATGAGCAT GCTGCCGCGT CTTAAGCCGA AGGTGTTCTA CGATCTCGTC
ATCGAGGTGG CGATCGTGCG GCCAGGACCG ATCCAGGGCG ACATGGTGCA TCCCTATCTG
AAGCGCCGGG AGCAGCGGGC CAAGAACATT CCGATCAAAT ATCCGAGCAA GGAGCTGGAA
ACGGTTCTGG AAAGAACCCT CGGCGTGCCC TTGTTCCAGG AACAGGCCAT GCAGATCGCC
ATTACCGCCG CAGGCTTCAA ACCGGCGGAA GCCGACAAGC TTCGCAGAGC GATGGCGACA
TTCAAGAGAA CGGGTACGAT CGGCAACTTC GAAAAGCGGT TTATCGAGGG AATGGTTTCA
AAGGACTATG ATCCGGAGTT CGCGAAGCAA TGTTTCAACC AGATCAAAGG CTTCGGCGAA
TACGGTTTCC CGGAAAGCCA TGCCGCCTCC TTCGCACTGC TCGTCTATGC CTCCTCATGG
CTCAAGGCCT ATTATCCCGA CGTCTTCTGC ACGGCGATGC TGAATTCCCA GCCGATGGGC
TTTTATGCGC CGGCGCAGCT GGTGCGGGAT GCACGCGAGC ACGGGGTAGC GATCCTGCCG
GTCGATATCA ATGACTCGAA CTGGGATTGC GGTCTGGAAG AGGCCGCTTT CGATCGGAAT
GCTATCGATT TTCGGCATCA TGAGATGCGC GAGATCATCA AGACCCGGCA TGCGGTGCGG
CTCGGCTTCC GGCAGATCAA GGGCCTTTCG ACAGACGATA TGGAACGGCT CGTCAGCCAT
CGCGGCGAAG GCTACAGCTC GGTGCGTGAT CTCTGGCTGC GGTCCGGTCT GCAGAAATCG
GTCATCGAGC GACTGGCGGA TGCCGATGCG TTCCGATCCC TCAAACTGTC ACGACGCGAC
GCGCTCTGGG CAGTGCGGGC GCTGGATGTG AGGAGTGCGA CCGAGGAGCT GCCGCTTTTC
GAGCAGGTTC GTCATGTCGA CCTCCAGGCC GAGCCTGCGG CAAAGTTGCC GGAAATGCTG
CCCGGAGAGC AGGTTATCGA GGACTATCGT TATCTCTCAC TGTCGCTGAA GGCGCACCCC
GTCTCCTTCC TGCGTGAGGA ATTGCGCAAG GCCGGCATCA CACGCAATGT CGATCTGTTG
AAGGTCGCGA ACGGAAAGAG GGTGACGATC GCGGGCCTCG TGCTGGTGCG CCAACGGCCT
GGTTCGGCCA AAGGCGTGAT CTTCATGACG CTGGAAGACG AGACCGGCGT GGCCAATGCG
ATCGTCTGGT CGAAAATGTT CGACAAATAC CGCTCGGTCG TGATGGGCGC TCGGCTGGTG
AAAATCCGCG GCAGGCTGCA ATGCCAGAGC GGGGTGATCC ATACCGTCGT CGAGCATATC
GAGGACATGA CGCCGGCACT CGGTATCCTG CAACGCGAGG TCCGGCGTTT CGGAGTCTGC
GAGCGAGCAG ACGAGGTGCT GAGGCCGGGT GCCGATCAGC GGCAGAAAAA GCTTGTAAAT
GCGCAGGAAA CGGCGGACCC GGAAAAACGC ATGGTTGCCA CAGGCCGCCA TGCGGGCGCG
GCGGAAACCG CTGAGGTGAT GCCGCGCGGA CGCAACTTTC ATTAA
|
|---|
| Protein sequence | MTIARALFEI GTRTNFSFLE GASGPEEMVV QAARLRLGGL GIADRNSVAG VVRAHAQAEQ
LEERYKNKDA ILAQAKKEGK KEEILDPIRI QPGARLVFSD GTPDILAYPR SRRGWANLCR
LLSAGNLKEE AVKGSCILTE AELMEWGDEM MLALVPDRTL VGHQAGQPTL EDYLERFRRR
FRKAFYMALA PAYDGRDRQV FAVLAMLAAR NRVPLIATNQ PLYHHPERRP LSDVVIAIRE
HVQISQAGFL LAPNAERYLK DSREMARIFR EYPNAIENTQ TFFDRLTFSL KELEHNYPPE
NDPGETPQET LERLTRAGAA RRYPKGIPPK VAPQIEYELD LIKKKKYASY FLTVHRIIQH
ARYELKVLCQ GRGSAANSVI CYCLEITEVN PEKSTLLFDR FISMDRDEPP DIDVDFEHDR
REEVIQFIYK RYGIEHAGLT AGVTTYRTRS AGREVSKAFG LSEDVQSAIS SLVWGWSEDN
LLERDAKAAG LDIKDPVTRN VLQYATELLG FPRHLTQHVG GFVITRDRLD EVVPIMKTAM
PDRYMIEWDK DDLDNVKILK VDVLALGMLT CLRKAFSLLE LHYDVKKTLA DLGNKEHGDE
GEPVYEMMGR ADTLGVFQIE SRAQMSMLPR LKPKVFYDLV IEVAIVRPGP IQGDMVHPYL
KRREQRAKNI PIKYPSKELE TVLERTLGVP LFQEQAMQIA ITAAGFKPAE ADKLRRAMAT
FKRTGTIGNF EKRFIEGMVS KDYDPEFAKQ CFNQIKGFGE YGFPESHAAS FALLVYASSW
LKAYYPDVFC TAMLNSQPMG FYAPAQLVRD AREHGVAILP VDINDSNWDC GLEEAAFDRN
AIDFRHHEMR EIIKTRHAVR LGFRQIKGLS TDDMERLVSH RGEGYSSVRD LWLRSGLQKS
VIERLADADA FRSLKLSRRD ALWAVRALDV RSATEELPLF EQVRHVDLQA EPAAKLPEML
PGEQVIEDYR YLSLSLKAHP VSFLREELRK AGITRNVDLL KVANGKRVTI AGLVLVRQRP
GSAKGVIFMT LEDETGVANA IVWSKMFDKY RSVVMGARLV KIRGRLQCQS GVIHTVVEHI
EDMTPALGIL QREVRRFGVC ERADEVLRPG ADQRQKKLVN AQETADPEKR MVATGRHAGA
AETAEVMPRG RNFH
|
|---|
| |