Gene Rleg_4183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4183 
Symbol 
ID8014973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4278496 
End bp4280037 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content60% 
IMG OID644826753 
ProductABC transporter related 
Protein accessionYP_002977963 
Protein GI241206867 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA GCCCGACAAC CATGGCCGCC GTGCGCGCGA GCGGCGCGGT CCCGAATGCG 
GAATATCTCT TGAGCGCCGA GGGTGTCCGC AAGGAATTTC CTGGTGTCGT CGCACTCGAT
GACGTGCAGT TCCGGCTGAA GCGCGCCTCC GTGCATGCGC TGATGGGCGA AAACGGCGCC
GGCAAATCGA CATTGATGAA GATCCTCGCC GGCATCTACA CGCCCGATAA GGGCGATATT
CGGCTGAAAG GGATCGAGAT CCAGCTGAAG TCCCCACTCG ACGCGTTGGA GAACGGCATT
GCCATGATCC ATCAGGAACT GAACCTGATG CCGTTCATGA CGGTTGCCGA AAATATCTGG
ATTCGCCGCG AACCGAAGAA CCGCCTCGGC TTCATCGATC ACGGCGTGAT GCATCGCATG
ACCGAGGAAC TGTTTACTCG GCTCAATATC GCCATCGACC CCGATATCGA GGTCCGCCAC
CTCTCGGTCG CCAACCGGCA GATGGTCGAG ATCGCCAAGG CGGTTTCCTA TAATTCCGAC
GTGTTGATCA TGGACGAGCC GACTTCGGCG CTGACGGAGC GCGAAGTCGA GCATCTTTTC
CGTATTATCC GCGACCTCAG GGCCCAAGGC ATCGGCATCG TCTACATCAC CCACAAGATG
AACGAGCTTT TCGAGATCGC CGACGAGTTC TCCGTCTTCC GCGACGGACG ATATATTGGC
ACGCATGCCT CGACCGACGT CACCCGCGAC GACATCATCC GCATGATGGT CGGGCGCGAG
ATCACCCAGA TGTTTCCCAA GGAAGAGGTG CCGATCGGCG AGGTCGTGCT CTCCGTCAAG
GATCTTTGTC TCAAGGGCGT CTTCAACAAC GTCTCCTTCG AGGTCAGGGC CGGCGAAATC
CTCGGTGTGG CCGGCCTCGT TGGCTCCGGC CGGTCGAATG TCGCCGAAAC GCTGTTTGGG
GTGACGCCGG CAAGCTCCGG CTCGATCGAG CTCTACGGCA AGCCGGTGAC CATTTCTTCG
CCGACCGAGG CCATCCGCAA TCGGATGGCG TTCCTGACTG AGGACCGCAA AGATACCGGC
TGCCTGCTGA TCCTCGATAT TCTCGAGAAT ATGCAGATCG CCGTTCTACA GGACAGATAC
GTCAAGGGCG GCTTCGTGCA GCAGGGCGCA GTCGAGGCAA CCTGCGAAGA CATGGCAAAA
AAGCTGCGCG TGAAAACGCC CAATCTTTAC GAGCGGGTGG AAAATCTTTC GGGCGGCAAT
CAGCAGAAGG TGCTGATCGG GCGCTGGCTG CTCACCAATC CGCGCATCCT CATCCTCGAC
GAGCCGACGC GTGGCATCGA TGTCGGCGCC AAGGCGGAAA TCCACCGGCT GGTCACGGAG
ATGGCGCGAG ATGGCGTGGC GGTGGTGATG ATCTCATCCG AGATGCCCGA AGTTCTCGGG
ATGAGCGATC GCATCATGGT CATGCACGAA GGACGCGTGA CCGGTTTCCT CAATCGCGAC
GAAGCAACGC AGATCAAGGT GATGGAGCTG GCTGCGCAGT GA
 
Protein sequence
MAVSPTTMAA VRASGAVPNA EYLLSAEGVR KEFPGVVALD DVQFRLKRAS VHALMGENGA 
GKSTLMKILA GIYTPDKGDI RLKGIEIQLK SPLDALENGI AMIHQELNLM PFMTVAENIW
IRREPKNRLG FIDHGVMHRM TEELFTRLNI AIDPDIEVRH LSVANRQMVE IAKAVSYNSD
VLIMDEPTSA LTEREVEHLF RIIRDLRAQG IGIVYITHKM NELFEIADEF SVFRDGRYIG
THASTDVTRD DIIRMMVGRE ITQMFPKEEV PIGEVVLSVK DLCLKGVFNN VSFEVRAGEI
LGVAGLVGSG RSNVAETLFG VTPASSGSIE LYGKPVTISS PTEAIRNRMA FLTEDRKDTG
CLLILDILEN MQIAVLQDRY VKGGFVQQGA VEATCEDMAK KLRVKTPNLY ERVENLSGGN
QQKVLIGRWL LTNPRILILD EPTRGIDVGA KAEIHRLVTE MARDGVAVVM ISSEMPEVLG
MSDRIMVMHE GRVTGFLNRD EATQIKVMEL AAQ