Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4164 |
Symbol | |
ID | 8014956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4249613 |
End bp | 4250293 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644826734 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002977944 |
Protein GI | 241206848 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCACT GGCTCCAACT GATGGCGGAA TCGCTACCCT CGCTCCTGTG GGCGGGGCTG ATCTTCACCA TTCCGCTGAC CCTGCTATCC TTCGTCTTTG GCCTGGCCCT CGGGCTCGCC ACCGCAATCG CCCGGCTCTT CGGGCCGATG CCGCTTTCGG CCGTCGCGCG CTTCTATGTC TGGGTCATCC GCGGCACGCC GCTGCTGGTG CAGCTCTTCG TGATCTTCTA CGGCCTGCCG AGCCTCGGCA TCCTGCTCGA TGCCTTTCCG GCCGCCCTCA TCGGCTTCAC GCTGAATATC GGCGCCTACA GCTCCGAGAT CATCCGCGCC GTCATTTCTT CGGTGCCGAA GGGCCAATGG GAAGCAGCCT ATTCGATCGG CATGAGCTGG CGCCAGGCGA TGAGCCGCAC CATCCTGCCG CAGGCCGCCC GCGTCGCCGT GCCGCCTTTG TCGAACACCT TCATCTCGCT GGTCAAAGAC ACCTCGCTTG CTGCGGCCAT CACCGTGCCC GAGCTCTTCC AGGCAGCACA GCGCATCGTC GCCACCACCT ATGAGCCGTT GATCCTCTAT ATCGAGGCGG CGCTGATCTA TCTCGTCCTG AGCTCCGTCC TCTCGCAGTT GCAGGTGCGG CTGGAACGCC GCTTCGCGCG TTATGGCGGC ATGCTGGAGG CAAATGCATG A
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Protein sequence | MAHWLQLMAE SLPSLLWAGL IFTIPLTLLS FVFGLALGLA TAIARLFGPM PLSAVARFYV WVIRGTPLLV QLFVIFYGLP SLGILLDAFP AALIGFTLNI GAYSSEIIRA VISSVPKGQW EAAYSIGMSW RQAMSRTILP QAARVAVPPL SNTFISLVKD TSLAAAITVP ELFQAAQRIV ATTYEPLILY IEAALIYLVL SSVLSQLQVR LERRFARYGG MLEANA
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