Gene Rleg_4160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4160 
Symbol 
ID8014952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4245362 
End bp4246552 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID644826730 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002977940 
Protein GI241206844 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGTC ATGTGAGTGC GCCGGGAGCC CGGAGCGGCT TCATTACCAG AAGCAGGGCG 
GCGGTTTCCC TGCTCTTTCT TATGAATGGT TTTGTCGTCG GCTGCTGGGC GCCGAAGATC
CCGGATTTTG CCGAGCGTCT GGCGCTGACC AAGTTCGAGC TTGGGCTGAT GATCCTCGTC
TTCGGCGTCG GCTCGCTGGT CATGATGCCG ATCGCCGGTG CGCAGATCGC CAAACACGGC
TCGCGTGTCG TCGTTCAGGT CCTGGCCGTC TCTGTGCTGC CGTTGCTGCT GGCATTGACG
CTGGCGCCAA ATGTGCTGAC CGGGGCAATC TCGCTCTTCC TGTTCGGCGG CTTCATCGGC
GCAATGGATG TGGCGATGAA TGCCAATGCA GTGTCGGTCG AGAAATCCAT GCGCCGCGCC
ATCATGTCGT CCTGCCACGC TTTCTGGAGC CTTGGCGGAC TGATCGGCTC AGGTCTCGGC
GGCATCGTGA TCTCCAAGCT CGGTATTCTC GGCCATGCGC AACTGGCGAC GGTGCTGGCG
GCGATCTTCC TTGCCGTCGC CTGGCCGATG ATCCTTGCGG ATCCGCCGCA TCCCGACGCC
AAGAAGGAAA AGACGAAGCT GCCGATGGTA CCGCTGCCGT GGCTGCTCGG ATTGATGGCG
CTGTTCAGCA TGGTGCCTGA AGGCGCTGTT CTCGACTGGG GCGCGCTCTA TCTCCGGCAG
GAAATGGGTG CATCCGTGGC GCTTTCCGGC CTTGGTTTCG CAGCCTTTTC GGCGACCATG
GCAATCATGC GCTTTGCCGG CGACCTGGTG CGCGACCGCC TGGGCGGCGT CAAGACGCTA
CGCATCTGCA CTTTGTTTGC CATTGTCGGC ATGCTGCTTG CCGGCCTGGC GCCCAATGCC
GAGCTTGCCA TCCTGGGCTT TGCGTTTTGC GGTATCGGCA TTTCCAACAT GGTGCCGATC
GCTTTCTCGG CGGCGGGCAA TATTCCCGGA CTCAAGCCCG GCATCGGCAT CTCGGTGGTC
ACGACCATGG GCTATTCCGG CATGCTGGTT GCGCCATCGT TGATCGGCTT CGTCGCCGAG
CATATCGGTT TTGCCGTCGT TTTCATGGCG CTGCCGGTGC TGCTCATCGT CGTTCTGCTG
CTCTCCAACC TGGCCCATTA TGCCGATGAG ACCTCCGGAG GCGGTCACTG A
 
Protein sequence
MDSHVSAPGA RSGFITRSRA AVSLLFLMNG FVVGCWAPKI PDFAERLALT KFELGLMILV 
FGVGSLVMMP IAGAQIAKHG SRVVVQVLAV SVLPLLLALT LAPNVLTGAI SLFLFGGFIG
AMDVAMNANA VSVEKSMRRA IMSSCHAFWS LGGLIGSGLG GIVISKLGIL GHAQLATVLA
AIFLAVAWPM ILADPPHPDA KKEKTKLPMV PLPWLLGLMA LFSMVPEGAV LDWGALYLRQ
EMGASVALSG LGFAAFSATM AIMRFAGDLV RDRLGGVKTL RICTLFAIVG MLLAGLAPNA
ELAILGFAFC GIGISNMVPI AFSAAGNIPG LKPGIGISVV TTMGYSGMLV APSLIGFVAE
HIGFAVVFMA LPVLLIVVLL LSNLAHYADE TSGGGH