Gene Rleg_4103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4103 
Symbol 
ID8014901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4177324 
End bp4178832 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content62% 
IMG OID644826673 
Productextracellular solute-binding protein family 5 
Protein accessionYP_002977883 
Protein GI241206787 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CCAAATTGCT GACCGCCACC GTTGCCGGCG CGCTGTTTGC GCTTCCTGCC 
TTCGCCGTCG ACCTGAAGAT CGGATTGCAG GACGATGCCG ACGTGCTCGA TCCCGCGCAG
TCACGCACCT TCGTCGGCCG CATCGTCTAT ACTGCAATGT GCGACAAGCT GGTCGACGTC
TCGCCGGATC TGAAGATCGT GCCGCAGCTT GCCACCGAAT GGAGCTGGTC GGCCGACGGC
AAAGAGCTCA CCATGAAGCT GCGCCAAGGC GTCAAGTTCC ATGACGAGAC CCCGTTCAAC
GCCGAAGCCG TCGTCGCCAC CATCGAGCGC AACATCACCT TGCCGGAATC ACGCCGCAAG
AGCGAGCTGA CCTCGGTCGC AAAGGTCGAG GCGACAAGCG AATACGAGGT CAAGTTCACC
CTCAAGGCGC CTGACGTCAC CCTTCTTGCC CAGCTTTCCG ACCGCGCCGG CATGATCGTC
TCGCCGAAGG CCGCCAAGGA GCTCGGCGCC AAGTTCGGCG ATCACCCGGT CTGCGCCGGT
CCGTTCAAGT TCGTCGAACG CATCCAGCAG GATCGCATCG TGCTCGAAAA GTTCCAGGAC
TACTGGAACA AGGACAAGAT CTTCATCGAC AAGCTCACCT ATCTGCCGAT CCCGGATACG
ACGGTGCGCC TCGCCAATCT GCGTTCCGGC GATCTCGACA TGATCGAGCG CCTGGCCGCG
ACCGATGCTG AAGCCGTGAA GGCGGATTCG AGCCTGGTCT ATGCCGACGC CGTCGGCACC
GGCTACATGG CGCTCTATAC CAATATCGGC AACGGCGCGC GTGCCGACAA TCCTTTCGGC
AAGGACAAAC GCCTGCGCCA GGCTTTCTCG CTGGCGATCG ACCGCGATGC CGTCAACCAG
ATCGTCTATG AAGGCACGGC CGTCTCCGGC AACCAGCCCT TCCCGCCGAG CAGCCCGTGG
TTCGACAAGG ATATTCCCGT CCCCGCCCGC GATCTCGACA AGGCCAAGGC GCTGATCAAG
GAAGCCGGCT TCGACCGCGT GCCGATCGAG CTGCAGATCC CGAACAATCC CGTTGCCATG
CAGATGATGC AGATCATCCA GTCGATGGTC GGCGAAGCCG GCTTCGACGT CAGCCTGAAG
TCGACGGAAT TCGCCACGCT GCTGAGCGAG CAGACCGCCG GCAACTATCA GCTCAGCCGT
TCCGACTGGT CCGGCCGCGT CGATCCCGAC GGCAATATCC ATCAGTTCAT CACCTGCAAG
GGCGGCATCA ACGACACGAA ATACTGCAAC GCCGAGGTGG ACAAGCTGCT GAACGAAGCT
CGTGCTTCGA CCGACGATGC CGTGCGCAAG CAGAAATACG ATGCCGCCGC CGTCATCCTC
AACGACGATC TGCCGATCAT CTATCTCGGC CATCAGTCCT GGATCTGGGC GCTGCACAAG
AACATCACCG GCTTCGTTCC GTCGCCGGAT GGCATGATCC GCCTCGTCGG CGTCAAGAAA
GCCGGCTGA
 
Protein sequence
MKIAKLLTAT VAGALFALPA FAVDLKIGLQ DDADVLDPAQ SRTFVGRIVY TAMCDKLVDV 
SPDLKIVPQL ATEWSWSADG KELTMKLRQG VKFHDETPFN AEAVVATIER NITLPESRRK
SELTSVAKVE ATSEYEVKFT LKAPDVTLLA QLSDRAGMIV SPKAAKELGA KFGDHPVCAG
PFKFVERIQQ DRIVLEKFQD YWNKDKIFID KLTYLPIPDT TVRLANLRSG DLDMIERLAA
TDAEAVKADS SLVYADAVGT GYMALYTNIG NGARADNPFG KDKRLRQAFS LAIDRDAVNQ
IVYEGTAVSG NQPFPPSSPW FDKDIPVPAR DLDKAKALIK EAGFDRVPIE LQIPNNPVAM
QMMQIIQSMV GEAGFDVSLK STEFATLLSE QTAGNYQLSR SDWSGRVDPD GNIHQFITCK
GGINDTKYCN AEVDKLLNEA RASTDDAVRK QKYDAAAVIL NDDLPIIYLG HQSWIWALHK
NITGFVPSPD GMIRLVGVKK AG