Gene Rleg_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4088 
Symbol 
ID8014887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4160724 
End bp4161407 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content61% 
IMG OID644826657 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002977868 
Protein GI241206772 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC GCACCATTCT TCTGGTGGAT GACGACGATG ACCTTCGGCA GACGCTGACG 
GAGCAATTGT CGCTGTATGA GGAATTCACG GCTCTGCAGG AAGCCAACGC CGGCAAAGGT
GTCGCGACCG CCCGCGCGAC GCCGATCGAC CTGCTGATCA TGGATGTCGG CCTGCCCGAT
ATGGACGGCC GCGAGGCAGT GAAGCTGCTG CGCAAGGGCG GTTTCAAGGC GCCGATCATC
ATGCTGACTG GCCACGATAC CGATTCCGAC ACGATCCTCG GCCTCGAAGC CGGCGCCAAC
GACTATGTCA CCAAGCCCTT CCGCTTCGCC GTGCTGCTCG CCCGCATCCG CGTGCAGCTG
CGCCAGCATG AGCAGAGCGA GGACGCGACC TTTACCGTCG GCCCTTACCT CTTCAAGCCC
AGCCAGAAGC TCCTGACCAC CGATAACGGC CAGAAGATCC GACTGACGGA AAAGGAAGCG
GCGATCATCC GCTATCTCTA CCGCGCCGAA CAGAAGGTCG TCACCCGCGA CGTGCTGCTC
GAAGAGGTCT GGGGCTATAA TTCCGGCGTA ACGACGCATA CTCTGGAAAC CCACGTTTAT
CGCCTGCGCC AGAAGATCGA GCGAGATCCC TCCAATGCCG AAATCCTCGT CACGGAAAAC
GGCGGCTACA AGATCATACC CTAG
 
Protein sequence
MTARTILLVD DDDDLRQTLT EQLSLYEEFT ALQEANAGKG VATARATPID LLIMDVGLPD 
MDGREAVKLL RKGGFKAPII MLTGHDTDSD TILGLEAGAN DYVTKPFRFA VLLARIRVQL
RQHEQSEDAT FTVGPYLFKP SQKLLTTDNG QKIRLTEKEA AIIRYLYRAE QKVVTRDVLL
EEVWGYNSGV TTHTLETHVY RLRQKIERDP SNAEILVTEN GGYKIIP