Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4088 |
Symbol | |
ID | 8014887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4160724 |
End bp | 4161407 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644826657 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002977868 |
Protein GI | 241206772 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC GCACCATTCT TCTGGTGGAT GACGACGATG ACCTTCGGCA GACGCTGACG GAGCAATTGT CGCTGTATGA GGAATTCACG GCTCTGCAGG AAGCCAACGC CGGCAAAGGT GTCGCGACCG CCCGCGCGAC GCCGATCGAC CTGCTGATCA TGGATGTCGG CCTGCCCGAT ATGGACGGCC GCGAGGCAGT GAAGCTGCTG CGCAAGGGCG GTTTCAAGGC GCCGATCATC ATGCTGACTG GCCACGATAC CGATTCCGAC ACGATCCTCG GCCTCGAAGC CGGCGCCAAC GACTATGTCA CCAAGCCCTT CCGCTTCGCC GTGCTGCTCG CCCGCATCCG CGTGCAGCTG CGCCAGCATG AGCAGAGCGA GGACGCGACC TTTACCGTCG GCCCTTACCT CTTCAAGCCC AGCCAGAAGC TCCTGACCAC CGATAACGGC CAGAAGATCC GACTGACGGA AAAGGAAGCG GCGATCATCC GCTATCTCTA CCGCGCCGAA CAGAAGGTCG TCACCCGCGA CGTGCTGCTC GAAGAGGTCT GGGGCTATAA TTCCGGCGTA ACGACGCATA CTCTGGAAAC CCACGTTTAT CGCCTGCGCC AGAAGATCGA GCGAGATCCC TCCAATGCCG AAATCCTCGT CACGGAAAAC GGCGGCTACA AGATCATACC CTAG
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Protein sequence | MTARTILLVD DDDDLRQTLT EQLSLYEEFT ALQEANAGKG VATARATPID LLIMDVGLPD MDGREAVKLL RKGGFKAPII MLTGHDTDSD TILGLEAGAN DYVTKPFRFA VLLARIRVQL RQHEQSEDAT FTVGPYLFKP SQKLLTTDNG QKIRLTEKEA AIIRYLYRAE QKVVTRDVLL EEVWGYNSGV TTHTLETHVY RLRQKIERDP SNAEILVTEN GGYKIIP
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