| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4076 |
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| Symbol | rimM |
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| ID | 8014877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 4151806 |
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| End bp | 4152375 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826645 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_002977856 |
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| Protein GI | 241206760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAGC TTGAAAACCC CGTTCTGATG GCGACGATCG GTGGCGCGCA AGGCCTCCGG
GGCGAGGTGC GCGCCAAGGC CTATACGGCC GATCCCGGCG CGCTTGGCGA TTACGGGCAT
CTGCACAGCA TGGATGGCCG CAGCTTCGAA GTCCTCGAAA TCCGCGAGAT GAAGAATGTC
GTCGTCGTCC GTTTCCGCGG CGTCAACGAC CGCAATGCCG CCGAGGCCCT GAACGGGCTT
GAACTCTATA TCGAGCGGGA CAACCTGCCG GACGAGGAGC TGGAGGACGA CGAGTTCTAC
TATGCCGATC TCGAAGGGCT CGAGGCTCGC GACGACAAGG GTGTCAGTTA TGGCACCGTC
ACCGGCGTGT TCGATTTCGG CGCCGGCGAC CTGCTGGAAC TCAAAGGTCC GGGCAAACGC
CCGGTGCTGA TCCCCTTCTC GGAAGCCTCG GTGCTGGAGA TCGACCTCGA GGCCGGCACG
CTACTGATCG ATCCGCTGGC GGCGGGGCTG GTCGAAGATC CCGAAGAGCT TTCGAAATTC
ACTCCCGACA AGCCGAAAAA GAAGAAGTAA
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| Protein sequence | MTKLENPVLM ATIGGAQGLR GEVRAKAYTA DPGALGDYGH LHSMDGRSFE VLEIREMKNV
VVVRFRGVND RNAAEALNGL ELYIERDNLP DEELEDDEFY YADLEGLEAR DDKGVSYGTV
TGVFDFGAGD LLELKGPGKR PVLIPFSEAS VLEIDLEAGT LLIDPLAAGL VEDPEELSKF
TPDKPKKKK
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