| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4009 |
|---|
| Symbol | |
|---|
| ID | 8014818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 4087250 |
|---|
| End bp | 4087714 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644826578 |
|---|
| Product | C4-dicarboxylate transport system |
|---|
| Protein accession | YP_002977789 |
|---|
| Protein GI | 241206693 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.115079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC TCGCTTCTTC AGCGGTCTTC GTGATGACGA TCGTTGGTGT CCTCGTTGTC
GTCGCCCTAA TCCTTTCTAC CGGGCTTGGT GCCGTAGGCC GGTATCTCGG TCTTTCCGGA
ATCACTTGGT CATTTGAAAT GGTCGGCATC CTGTTCTTGT GGACGACCGC GATTGGTGCT
GTTCTGTCGG AGGTCGCCGG CGAAAACGTT TCCATCGACG GCAACACGTC CACCAGTGGC
CGGAACCGCT GGTTTCGCAT CTATCACAAT CTCATCCTGC TCACCGTTGC CGCCGCCTTT
CTGTGGAGCG GCAAGGCCAT GCTTGCGCGC ACGGGATTTG TTCCGACCCC CGTTATGCGC
GCGCCGAGTT GGATCGTTCA GAGCATCATC GTCTTCATGG GCGCCACTCT CGCCATCATC
GCCATTGCGC GCATCGTTTC GGCATTCCGG GAGCGTGTCC GATGA
|
|---|
| Protein sequence | MKRLASSAVF VMTIVGVLVV VALILSTGLG AVGRYLGLSG ITWSFEMVGI LFLWTTAIGA
VLSEVAGENV SIDGNTSTSG RNRWFRIYHN LILLTVAAAF LWSGKAMLAR TGFVPTPVMR
APSWIVQSII VFMGATLAII AIARIVSAFR ERVR
|
|---|
| |