Gene Rleg_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3995 
Symbol 
ID8014805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4072584 
End bp4073159 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content63% 
IMG OID644826564 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_002977775 
Protein GI241206679 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.602423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.111297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGCGAT TGATCATCGG CATATCAGGG GCTTCCGGTG CAATCTACGG ACTGCGTGCG 
CTGGAGATGC TGCGGGACTT CGACGATGTC GAGACGCATC TCGTCATATC GCCCGCGGCG
ATCCGCACGG CACTGGCCGA AGGGACGGGA AAGACCGCAG ACGAAATCCG TGGCCTCGCC
GACCGGGTCT ACAGCCACGG GGATATCGGC GCTTCGATTG CCTCCGGTTC CTTCCGGTGC
GACGGCATGC TGGTTGCGCC ATGCTCGATC AAGACGCTGA GCGGGATCGC GCATTGTTAT
GCGGACGATC TGATCGTGCG CGCCGCCGAT GTCTGCCTGA AGGAACGCCG CCGGCTGGTG
CTGATGGTGC GGGAAACGCC GTTGCATGCG GGCCATATCG CGCTGATGGA CCAGGCAACA
CGCAACGGCG CCGTCATCAT GCCGCCGGTG CCGAGCTTTT ACACGCTGCC GAAATCAATC
GCCGAAATGG TCGACCAGAC CGTGGGGCGT GCGCTGGATC AATTCGGGCT TCATCATCCG
ACGGTCCGGC GCTGGACGGA GGATCATAAC GACTGA
 
Protein sequence
MRRLIIGISG ASGAIYGLRA LEMLRDFDDV ETHLVISPAA IRTALAEGTG KTADEIRGLA 
DRVYSHGDIG ASIASGSFRC DGMLVAPCSI KTLSGIAHCY ADDLIVRAAD VCLKERRRLV
LMVRETPLHA GHIALMDQAT RNGAVIMPPV PSFYTLPKSI AEMVDQTVGR ALDQFGLHHP
TVRRWTEDHN D