Gene Rleg_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3991 
Symbol 
ID8014802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4067249 
End bp4067896 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID644826560 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002977771 
Protein GI241206675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.841796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.133123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGT TCACCTTCTG GGACATTCTG CGCAATCTTG TCTTCGCGAC ACGCTGGACC 
CTCATGCTTT CGCTCGCAGC CTTTGCCGGC GGCGCCATCG TTGGCCTGGC CATCCTGTCT
GCGCGGATAT CGAAAACACG CTGGCCGCGC AGCTTCGCGT CCGGCTACAT TGCCCTGTTT
CAGGGAACGC CGCTCCTGAT GCAGCTCTTT TTGATGTTTT TCGGCCTGCC GATGCTCGGT
TTCCGGATCG AGTCATGGAC CGCCGCCGTC TGCGGCCTGA CGTTCTACGC CAGCGCTTAT
CTTGCCGAAA TCTGGCGGAG CGGCGTCGAG GCGGTGCCGC GCGGGCAATG GGACGCCGCA
GCCAGCCTGG GCTTGCATCG TCTCCTCGAA CTTCGCCTTA TCATCCTGCC GCAGGCTTTC
CGGATCACGC GCGCGCCGAC CGTCGGGTTC TTGGTCCAGT TGATCAAGAG CACCGCACTG
GCCTCGATCC TCGGCTTCGA CGAACTGCTG AAAACCGCAA ACGCCATCAA CAACGCGACC
TTCGAACCTT TCAAGGTCTA CGGTCTCGTC GCAGTGATCT TCTTCGCCCT GTGCTATCCG
CTGACGCAAT ACGCCAGATT TCTGGAGAAG AAGGCGGCGT TTGGCTGA
 
Protein sequence
MIEFTFWDIL RNLVFATRWT LMLSLAAFAG GAIVGLAILS ARISKTRWPR SFASGYIALF 
QGTPLLMQLF LMFFGLPMLG FRIESWTAAV CGLTFYASAY LAEIWRSGVE AVPRGQWDAA
ASLGLHRLLE LRLIILPQAF RITRAPTVGF LVQLIKSTAL ASILGFDELL KTANAINNAT
FEPFKVYGLV AVIFFALCYP LTQYARFLEK KAAFG