Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3991 |
Symbol | |
ID | 8014802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4067249 |
End bp | 4067896 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644826560 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002977771 |
Protein GI | 241206675 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.841796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.133123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGT TCACCTTCTG GGACATTCTG CGCAATCTTG TCTTCGCGAC ACGCTGGACC CTCATGCTTT CGCTCGCAGC CTTTGCCGGC GGCGCCATCG TTGGCCTGGC CATCCTGTCT GCGCGGATAT CGAAAACACG CTGGCCGCGC AGCTTCGCGT CCGGCTACAT TGCCCTGTTT CAGGGAACGC CGCTCCTGAT GCAGCTCTTT TTGATGTTTT TCGGCCTGCC GATGCTCGGT TTCCGGATCG AGTCATGGAC CGCCGCCGTC TGCGGCCTGA CGTTCTACGC CAGCGCTTAT CTTGCCGAAA TCTGGCGGAG CGGCGTCGAG GCGGTGCCGC GCGGGCAATG GGACGCCGCA GCCAGCCTGG GCTTGCATCG TCTCCTCGAA CTTCGCCTTA TCATCCTGCC GCAGGCTTTC CGGATCACGC GCGCGCCGAC CGTCGGGTTC TTGGTCCAGT TGATCAAGAG CACCGCACTG GCCTCGATCC TCGGCTTCGA CGAACTGCTG AAAACCGCAA ACGCCATCAA CAACGCGACC TTCGAACCTT TCAAGGTCTA CGGTCTCGTC GCAGTGATCT TCTTCGCCCT GTGCTATCCG CTGACGCAAT ACGCCAGATT TCTGGAGAAG AAGGCGGCGT TTGGCTGA
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Protein sequence | MIEFTFWDIL RNLVFATRWT LMLSLAAFAG GAIVGLAILS ARISKTRWPR SFASGYIALF QGTPLLMQLF LMFFGLPMLG FRIESWTAAV CGLTFYASAY LAEIWRSGVE AVPRGQWDAA ASLGLHRLLE LRLIILPQAF RITRAPTVGF LVQLIKSTAL ASILGFDELL KTANAINNAT FEPFKVYGLV AVIFFALCYP LTQYARFLEK KAAFG
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