Gene Rleg_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3989 
Symbol 
ID8014800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4065642 
End bp4066439 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID644826558 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002977769 
Protein GI241206673 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.128732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC TTATGAAGTT GCGTTACACC GCCACCGCGG CAATTGCCGT TTTCGGCATC 
CTGGCAGGGG CCGCGCAGGC CGACGAACTT GCCGATATCA AGGCCGCAGG CGAAATCAAC
ATCGGCATCT TCTCCGATTT CCCGCCCTTC TCTTCGGCAA GCGCCGATAT GAGCATCAAG
GGCTATGACG TCGACGTCGC CCAGAAGATC GCCGACGGGC TCGGCGTGAA ACTCAATCTC
GTCAGCGTTA CCGGCCAGAA CAGGATCGCC TACCTGAACG ACGACCGCGT CGACCTGCTG
ATGAGCGTCG GCTATTCGAA GGAGCGTGCC GAGGTTATCG ATTTTGCCGC CCCGTACGCC
CCCTACTATA TCGCCGTCAT CGGTCCGGCT GCGCTGAAGG TGAGCGGCAA GGAAGACCTC
GCCGACAAGA CCGTTGCCGT CAATCGTGGG ACGCTCGAAG ACACGTCGCT GACGGCCGTC
GCCCCCGGCT CGGCTGCGAT CCAGCGTTTC GAGAACTATA ATTCGGTCAT CCAGGCCTTC
ATATCCGGCC AGACCCAGCT GATGGTCGTC GGCAACGATG TCGGTGCGCA GGTTCTGGCA
CGACAGGACG AACTGAAGCC GGAGCAGAAA TTCCAGCTCC TCAGCTCCCC CTCACACATC
GCGCTCCGCA AGGGCGAGGA AGGCCTGAAG AAAGTCGTCA ATGACAGCGT CGCCGCAATG
ATCTCCGATG GTTCGCTCGA CGCAAGCTCG AAGAGCTGGC TGAAAGCGCC GCTCAACCCT
GAAAACCTGA AGGACTGA
 
Protein sequence
MTALMKLRYT ATAAIAVFGI LAGAAQADEL ADIKAAGEIN IGIFSDFPPF SSASADMSIK 
GYDVDVAQKI ADGLGVKLNL VSVTGQNRIA YLNDDRVDLL MSVGYSKERA EVIDFAAPYA
PYYIAVIGPA ALKVSGKEDL ADKTVAVNRG TLEDTSLTAV APGSAAIQRF ENYNSVIQAF
ISGQTQLMVV GNDVGAQVLA RQDELKPEQK FQLLSSPSHI ALRKGEEGLK KVVNDSVAAM
ISDGSLDASS KSWLKAPLNP ENLKD