| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3988 |
|---|
| Symbol | |
|---|
| ID | 8014799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 4064562 |
|---|
| End bp | 4065557 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644826557 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_002977768 |
|---|
| Protein GI | 241206672 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0861741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATC CGCACTTCCG CGCCGTGGCG GCGAGCGTAT TCAAGGACGG CGACAGCCGC
AAATGGCCCT TCGCCGATCC TGCGACCTTT CTGGATGCCC GTTTCATCGA GAACGGCTTG
CGGCCCGAGG TGCTTGAGGC GCTTGACGTG GCTCTGATCG GCGTGCCGAT GGACCTCGGC
GTCACCAATC GCGCCGGCGC GCGGCTGGGG CCGCGGGCCG TCCGGGCGAT CGAGCGTATC
GGTCCCTACG AGCATGTTCT GCGTGTCGCG CCGATGGGAG GGCTAAAGGT CGCCGATGTC
GGCGACGTGC CGATGCGCAG CCGGTTCGGC CTCGCCGAGT GCCATGCCGA CATCGAGGCC
TGCTACCGGA TGATCGCGGC AACCGGGGTT ATCCCGCTGT CGGTCGGCGG CGACCATTCG
ATCTCCGGCG CCATCCTCAA GGGCCTGGCG GCCGGCCAGC CGGTCGGCAT GATCCACATC
GACGCTCATT GCGACACCGC TGGTCCCTAT GAGGGCTCGA AGTTCCATCA CGGCGCGCCC
TTCCGCGAGG CGGTTCTGGC GGGCGTGCTC GATCCGAAGC GTACGATCCA GATCGGCATC
CGCGGCGGCG GCGAATATCT CTGGGAGTTC TCCTTTGTCT CCGGCATGAC CGTCATCCAC
GCCGAAGAGG TGGCGGAGAT GGGCCTCAAG GCTGTGATCG CAAAGGCTCT AGAGGTTGTC
GGCGCCGGTC CGACCTATCT CAGTTTCGAC GTCGACAGCC TCGATCCGGC CTTCGCTCCG
GGAACCGGCA CGCCGGAAGT CGGCGGGCTT CAGCCGAGGG AGGCCCTGAC CCTGCTGCGC
GGCTTCAAAG GCATCAACCT CATCGGCGGC GACGTCGTGG AAATCGCGCC GCAATACGAC
AACACCACCA ACACCGCGCA GATCGCCGCG CAGGTCCTGT TCGAACTCCT GTGCCTCGCG
ATGTTCAGTC CCGCGGTCAG GACAAAGCTG ACCTGA
|
|---|
| Protein sequence | MEDPHFRAVA ASVFKDGDSR KWPFADPATF LDARFIENGL RPEVLEALDV ALIGVPMDLG
VTNRAGARLG PRAVRAIERI GPYEHVLRVA PMGGLKVADV GDVPMRSRFG LAECHADIEA
CYRMIAATGV IPLSVGGDHS ISGAILKGLA AGQPVGMIHI DAHCDTAGPY EGSKFHHGAP
FREAVLAGVL DPKRTIQIGI RGGGEYLWEF SFVSGMTVIH AEEVAEMGLK AVIAKALEVV
GAGPTYLSFD VDSLDPAFAP GTGTPEVGGL QPREALTLLR GFKGINLIGG DVVEIAPQYD
NTTNTAQIAA QVLFELLCLA MFSPAVRTKL T
|
|---|
| |