| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3978 |
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| Symbol | sdhA |
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| ID | 8014790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4054953 |
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| End bp | 4056794 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644826547 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002977758 |
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| Protein GI | 241206662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.490137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGA CTTCACCCGC CCAGAACGGC AAAGCCTACA AGTATGTCGA TCACTCCTAC
GACGTGATCG TCGTCGGCGC CGGCGGCGCC GGGCTGCGCG CCACGCTCGG CATGGCCGAG
CAGGGTTTCC GCACGGCCTG CATCACCAAG GTATTCCCGA CCCGCTCCCA CACGGTCGCG
GCCCAGGGCG GTATCGCCGC TTCGCTGCGC AACATGACGC CGGATAGCTG GCAGTGGCAC
CTCTACGACA CCGTCAAGGG CTCCGACTGG CTCGGCGACG TCGACGCCAT GCAGTATCTC
ACCATGGAAG CGCCGAAGGC GGTCTATGAG CTCGAGCACT ACGGCGTGCC GTTCTCGCGC
AACGAGGAAG GCAAGATCTA TCAGCGCCCG TTCGGCGGCC ACATGCAGAA TTACGGCGAA
GGCCCGCCGG TACAACGCAC CTGCGCCGTT GCCGACCGTA CCGGCCACGC CATCCTGCAT
ACGCTCTACG GCCAGTCGCT GCGCAACAAT GCCGAGTTCT TCATCGAGTA TTTCGCGCTC
GACCTGATCA TGTCGGAAGA CGGCAGCCGC TGCACCGGCG TCATCGCCTG GTGCCTCGAT
GACGGTACGA TCCATCGCTT CGCCGCCAAG ATGGTGGTGC TGGCGACCGG CGGCTACGGC
CGCGCCTATT TCTCGGCAAC GTCGGCCCAT ACCTGCACCG GCGACGGCGG CGGCATGGTG
GCGCGTGCCG GCCTGCCGCT GCAGGACATG GAATTCGTTC AGTTCCACCC GACCGGCATC
TATGGTTCGG GCTGTCTGAT CACCGAAGGC GCGCGCGGCG AAGGCGGTTA TCTCGTCAAC
TCCGAGGGCG AGCGCTTCAT GGAGCGTTAC GCGCCTTCGG CCAAGGACCT TGCCTCGCGC
GACGTCGTTT CGCGCTGCAT GACACTGGAA ATCCGCGAAG GCCGCGGTGT CGGCAAGGCG
AAGGACCACA TCTTCCTGCA TCTCGATCAT CTCGATCCAG CCGTTCTTCA TGAACGCCTG
CCGGGGATTT CCGAGAGCGC CAAAATCTTC GCCGGTGTCG ACGTTACACG CGAACCGATC
CCGGTTCTGC CGACCGTTCA CTACAATATG GGCGGCATTC CCACGAATTA TTGGGGCGAA
GTGCTGAACG CCGACGGTGC CAATCCGGAA CGGATCATCC CCGGCCTGAT GGCTGTGGGC
GAGGCCGGCT GTGCCTCGGT GCACGGCGCC AACCGTCTCG GCTCCAACTC GCTGATCGAC
CTCGTGGTCT TCGGCCGCGC CGCTGCGATC CGCGCCGGCG AGGTGATCGA CCGCGCAGCG
CCGATCCCGC ATCTCAACGT CGCCGCCTGC GACAAGATCA TGGACCGCTT CGACGGTCTG
CGTCACGCCA GCGGCGGCAC ACCGACGGCG GAACTGCGCG AGAAGATGCA GCGCGCCATG
CAGGAAGACG CCGCGGTGTT CCGCACGCAG GAATCGCTGG AGTCGGGCTG CCAGCGCATC
TCGGCAATCT GGGGCGAGAT GAAGGACATC AAGGTCACCG ACCGCTCGAT GATCTGGAAC
TCGGATCTGG TCGAGACGCT GGAGCTGCAG AACCTGATGG CCAACGCCAT CACGACGATC
TACGGAGCCG AGGCCCGCAA GGAGAGCCGC GGTTCGCATG CCCGCGAAGA TTATACCGAG
GGTGCATTCG CCGGCCGCGA CGACGTCAAC TGGCGAAAAC ACACGCTCGC CTGGGTGAAC
GAGGCAGGCG ATGTGAAACT CGACTATCGT CCTGTTCACA CCGAGCTCAT TGCCGAAGGC
ATCGATCCGC ACAAGATCGA GCCGAAGGCT CGCGTGTACT GA
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| Protein sequence | MAPTSPAQNG KAYKYVDHSY DVIVVGAGGA GLRATLGMAE QGFRTACITK VFPTRSHTVA
AQGGIAASLR NMTPDSWQWH LYDTVKGSDW LGDVDAMQYL TMEAPKAVYE LEHYGVPFSR
NEEGKIYQRP FGGHMQNYGE GPPVQRTCAV ADRTGHAILH TLYGQSLRNN AEFFIEYFAL
DLIMSEDGSR CTGVIAWCLD DGTIHRFAAK MVVLATGGYG RAYFSATSAH TCTGDGGGMV
ARAGLPLQDM EFVQFHPTGI YGSGCLITEG ARGEGGYLVN SEGERFMERY APSAKDLASR
DVVSRCMTLE IREGRGVGKA KDHIFLHLDH LDPAVLHERL PGISESAKIF AGVDVTREPI
PVLPTVHYNM GGIPTNYWGE VLNADGANPE RIIPGLMAVG EAGCASVHGA NRLGSNSLID
LVVFGRAAAI RAGEVIDRAA PIPHLNVAAC DKIMDRFDGL RHASGGTPTA ELREKMQRAM
QEDAAVFRTQ ESLESGCQRI SAIWGEMKDI KVTDRSMIWN SDLVETLELQ NLMANAITTI
YGAEARKESR GSHAREDYTE GAFAGRDDVN WRKHTLAWVN EAGDVKLDYR PVHTELIAEG
IDPHKIEPKA RVY
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