Gene Rleg_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3970 
SymbolsucA 
ID8014784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4045114 
End bp4048098 
Gene Length2985 bp 
Protein Length994 aa 
Translation table11 
GC content62% 
IMG OID644826539 
Product2-oxoglutarate dehydrogenase E1 component 
Protein accessionYP_002977750 
Protein GI241206654 
COG category[C] Energy production and conversion 
COG ID[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 
TIGRFAM ID[TIGR00239] 2-oxoglutarate dehydrogenase, E1 component 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGC AAGAAGCCAA CGAGCAGTTT CAGATCACCT CGTTTCTGGA TGGCGCCAAC 
GCTGCCTATA TCGAGCAGCT CTACGCGCTG TATGAAGAGG ACCCAGCATC GGTCGACGAT
CAGTGGCGGT CTTTCTTCAA GGCGCTGGAG GAGGATCCCA GCGATGTGAA GAGGGCGGCC
AAAGGGGCTT CCTGGCGCAA GAAGAACTGG CCGCTTCAGG CCAGCGGCGA TCTGGTGTCG
GCTCTCGATG GCGACTGGGG CATCGTCGAG AAGGTGATCG AGACCAAGGT CAAGGCCAAG
GCCGAAGCTC AGGGCAAGCC TGCCGACAGC ACCGAGGTGC TGCAGGCGAC GCGCGATTCC
GTGCGCGCCA TCATGATGAT CCGCGCCTAC CGCATGCGCG GTCACCTGCA TGCCAAGCTC
GACCCGCTCG GCATCGCCGC TCCCGTCGAC GACTATCATG AACTGTCGGC GGAGAATTAC
GGTTTCACGG CCGCCGATTA CGATCGCAAG ATCTTCATCG ACAACGTGCT CGGCTTGGAA
TACGCGACCA TCCGCGAGAT GATCGAAATC CTCGAGCGCA CCTATTGCTC GACGCTCGGC
GTCGAATTCA TGCATATCTC CAATCCGGAA GAGAAGGCGT GGATTCAGGA GCGCATCGAA
GGACCGGACA AGGGTGTGGC CTTCACGCCG GAAGGCAAGA AGGCGATCCT TGCCAAGCTG
GTCGAAGCCG AAGGCTACGA GCAGTTCCTC GACGTCAAGT TCAAAGGCAC GAAGCGTTTC
GGTCTCGACG GCGGCGAATC GCTGATCCCG GCGCTGGAGC AGATCCTCAA GCGCGGCGGT
CATCTCGGCC TCAAGGAAGC CGTGTTCGGC ATGGCCCATC GCGGCCGTCT GAACGTGCTC
TCCCAGGTCA TGGGCAAGCC GCACCGGGCG ATCTTCCATG AGTTCAAGGG CGGCTCGGCC
GCTCCCGATG AGGTCGAGGG CTCGGGTGAC GTCAAGTACC ATCTCGGCGC CTCCTCCGAC
CGCGAATTCG ACGGCAACAA GATCCACGTT TCGCTGACGG CGAACCCGTC GCATCTCGAA
ATCGTCGACC CCGTCGTCAT GGGCAAGGCC CGCGCCAAGC AGGATATGAA CGCCACCGTC
TGGGACGGCG ACATCATCCC GCTTTCCGAA CGCGCCAAGG TTCTGCCGCT GCTGATCCAT
GGCGACGCGG CCTTTGCCGG CCAGGGTGTC ATTGCCGAAA TCCTCGGCCT TTCCGGTCTG
CGCGGCCATC GCGTCGCCGG CACCATGCAT GTGATCATCA ACAACCAGAT CGGCTTCACC
ACAAACCCGG CCTTCTCGCG CTCGTCGCCT TATCCGTCTG ACGTCGCCAA GATGATCGAG
GCGCCGATCC TGCACGTCAA CGGCGACGAT CCGGAAGCCG TGGTTTATGG GGCGAAGATC
GCCACCGAAT TCCGCATGAA GTTCCACAAG CCTGTTGTGC TCGACCTGTT CTGCTACCGC
CGCTACGGCC ACAATGAAGG CGACGAACCG TCCTTCACGC AGCCGAAGAT GTACAAGGTG
ATCCGCGCCC ACAAGACCGT GCTGCAGCTC TATGCGGCCC GTCTCGTCGC CGAGGGCCTG
CTCACCGACG GTGAAGTCGA GAAGATGAAG GCCGACTGGC GCGCCCATCT CGAGCAGGAG
TTCGAGGCCG GCCAGCACTA CAAGCCGAAC AAGGCCGACT GGCTTGATGG TGAGTGGTCG
GGACTGCGCA CGGCCGACAA TGCCGACGAG CAGCGCCGCG GCAAGACCGC CGTGCCGATG
AAGACGCTGA AGGAGATCGG CCGCAAGCTC TCTGAGATCC CGGCGGGCTT CAACGCACAC
CGGACGATCC AGCGCTTCAT GGAAAACCGG GCCAACATGA TCGCCACCGG CGAGGGTATC
GACTGGGCGA TGGCCGAAGC GCTCTCCTTC GGCGCGCTCT GCGTCGAAGG CAGCAAGATC
CGCCTCTCCG GCCAGGATTG TGAACGCGGC ACCTTCTCGC AGCGTCACTC GGTTCTCTAC
GATCAGGAAA CCGAAGAGCG CTACATCCCG CTCGCCAATC TTTCGCCGAC GCAGGGTCGC
TACGAAGTCA TCAATTCGAT GCTTTCGGAA GAGGCCGTGC TCGGTTTCGA ATATGGCTAT
TCGCTCGCCC GCCCGAATGC GCTGACGCTC TGGGAAGCCC AGTTCGGCGA TTTCGCCAAC
GGCGCGCAGG TGGTCTTCGA CCAGTTCATC TCGTCGGGCG AACGCAAGTG GCTGCGCATG
TCGGGCCTCG TCTGCCTGCT GCCTCACGGT TATGAAGGTC AGGGTCCCGA ACACTCCTCG
GCCCGCCTCG AACGTTTCCT GCAGCTTTGC GCGGAAGACA ACATGCAGGT CGCCAACGTC
ACGACGCCGG CAAACTATTT CCACATCCTG CGCCGGCAGC TGAAGCGCGA CTTCCGCAAG
CCGCTGGTCC TGATGACGCC GAAGTCGCTG CTGCGCCACA AACGGGCGGT CTCGACGCTT
GCCGAAATGG CCGGCGAATC CGCCTTCCAT CGTCTGCTCT GGGACGATGC CGAGGTGATC
AAGGACGGCC CGATCAAGCT GCAGAAGGAC AACAAGATCC GCCGCGTCGT CATGTGCTCC
GGCAAGGTCT ATTACGATCT TCTCGAAGAG CGTGAAAAGC GCGGCATCGA CGACATCTAT
CTCTTGCGCG TCGAGCAGCT CTATCCGTTC CCGGCGAAGG CGCTGATCAA CGAGCTGTCG
CGCTTCCGCA ATGCCGAGAT GGTCTGGTGC CAGGAAGAGC CGAAGAACAT GGGCGCATGG
TCGTTCATCG ACCCCTTCCT CGAATGGGTG CTCGCCCATA TCGATGCGAA GTACCAGCGC
GTCCGCTATA CCGGCCGTCC GGCCGCCGCC TCGCCGGCGA CGGGCCTGAT GTCCAAGCAT
CTGTCGCAGC TCGCCGCATT CCTCGAGGAT GCATTGGGCG GTTAA
 
Protein sequence
MARQEANEQF QITSFLDGAN AAYIEQLYAL YEEDPASVDD QWRSFFKALE EDPSDVKRAA 
KGASWRKKNW PLQASGDLVS ALDGDWGIVE KVIETKVKAK AEAQGKPADS TEVLQATRDS
VRAIMMIRAY RMRGHLHAKL DPLGIAAPVD DYHELSAENY GFTAADYDRK IFIDNVLGLE
YATIREMIEI LERTYCSTLG VEFMHISNPE EKAWIQERIE GPDKGVAFTP EGKKAILAKL
VEAEGYEQFL DVKFKGTKRF GLDGGESLIP ALEQILKRGG HLGLKEAVFG MAHRGRLNVL
SQVMGKPHRA IFHEFKGGSA APDEVEGSGD VKYHLGASSD REFDGNKIHV SLTANPSHLE
IVDPVVMGKA RAKQDMNATV WDGDIIPLSE RAKVLPLLIH GDAAFAGQGV IAEILGLSGL
RGHRVAGTMH VIINNQIGFT TNPAFSRSSP YPSDVAKMIE APILHVNGDD PEAVVYGAKI
ATEFRMKFHK PVVLDLFCYR RYGHNEGDEP SFTQPKMYKV IRAHKTVLQL YAARLVAEGL
LTDGEVEKMK ADWRAHLEQE FEAGQHYKPN KADWLDGEWS GLRTADNADE QRRGKTAVPM
KTLKEIGRKL SEIPAGFNAH RTIQRFMENR ANMIATGEGI DWAMAEALSF GALCVEGSKI
RLSGQDCERG TFSQRHSVLY DQETEERYIP LANLSPTQGR YEVINSMLSE EAVLGFEYGY
SLARPNALTL WEAQFGDFAN GAQVVFDQFI SSGERKWLRM SGLVCLLPHG YEGQGPEHSS
ARLERFLQLC AEDNMQVANV TTPANYFHIL RRQLKRDFRK PLVLMTPKSL LRHKRAVSTL
AEMAGESAFH RLLWDDAEVI KDGPIKLQKD NKIRRVVMCS GKVYYDLLEE REKRGIDDIY
LLRVEQLYPF PAKALINELS RFRNAEMVWC QEEPKNMGAW SFIDPFLEWV LAHIDAKYQR
VRYTGRPAAA SPATGLMSKH LSQLAAFLED ALGG