| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3965 |
|---|
| Symbol | |
|---|
| ID | 8014779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4041449 |
|---|
| End bp | 4042201 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644826534 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002977745 |
|---|
| Protein GI | 241206649 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0185509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA CACCTGTTGT TCTCATTACC GGCGGAAGCC GGGGTATCGG CGCCGCGGCT
GCACGGCTCG CGGCACGCCA GGGCTGGCGT GTCGCGGTGA ACTACGCCGC CAACCGTCAA
GCCGCGGATG CCGTCGTGGC TGCGATTGTC GAGGATGGCG GCGAGGCCGT GGCGATCCAG
GGGGATGTCG GCAAGGCTGC GGATATCGTC TCGATGTTTA CGACGGTCGA CCGGCATTTC
GGCCGGCTCG ACGGGCTCGT CAACAATGCC GGCATCGTCG ATTATCCCCA GCGCGTCGAC
GAGATGTCGG CGGAGCGGAT CGAGCGCATG CTGCGCGTCA ATGTGACAGG CTCGATACTC
TGCGCCGCAG AGGCCATACG TCGCATGTCG AGCCGGCATG GCGGGCAGGG CGGGGCGATC
GTCAACATCT CGTCGATGGC GGCGATCCTC GGTTCGGCGA CGCAGTATGT CGATTATGCC
GCCTCGAAGG CGGCGATCGA CACGTTCACC GTCGGGCTGG CGCGCGAGGT CGCAGCCGAG
GGTATCCGTG TGAATGCGAT AAGGCCCGGC GTCATCGAAA CCGACCTTCA TGCCTCCGGC
GGCCTGCCGG ATCGGCCGCG GGAACTGGCG CCGTCGATCC CGATGCAGCG CGCGGGCACG
CCCGCGGAGG TGGCGGATGC GATCCTCTAT CTTCTGTCAC CTTCGGCTTC CTATATCACC
GGCGCGATCC TCAATGTGAG CGGCGGCCGC TAG
|
|---|
| Protein sequence | MSDTPVVLIT GGSRGIGAAA ARLAARQGWR VAVNYAANRQ AADAVVAAIV EDGGEAVAIQ
GDVGKAADIV SMFTTVDRHF GRLDGLVNNA GIVDYPQRVD EMSAERIERM LRVNVTGSIL
CAAEAIRRMS SRHGGQGGAI VNISSMAAIL GSATQYVDYA ASKAAIDTFT VGLAREVAAE
GIRVNAIRPG VIETDLHASG GLPDRPRELA PSIPMQRAGT PAEVADAILY LLSPSASYIT
GAILNVSGGR
|
|---|
| |