| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3946 |
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| Symbol | |
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| ID | 8015871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4019185 |
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| End bp | 4021401 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644826515 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_002977726 |
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| Protein GI | 241206630 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.339061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAG ATTCGTCCGA TCTCTTTGGC GCGCTTTTCG AGGCACCGCC CGCGAACCGA
ACGGTTCCCG TGCTGGTGCC GATGCCGGCG CCGAAACCCT ATTCCTATTC GGTGCCGGAT
GGCATGGCGG TCGAGCCCGG CTCGGTCGTG CAGGTGCCGC TCGGGCCGCG GCAGGTGATC
GGCGTCGTCT GGGACGGCGG CGAGGACGGC GTCGATCCAA AGAAGCTTCG GCCGATCAGC
CATGTCTTCG ATTGCCCGCC GCTTGCCAGG GAGATGCGGG ATTTCATCGA TTGGGTGGCG
ACCTATACGC TCTCGCCGCC CGGCCTCGTC GCCCGTATGG CGCTGCGGGC GCCGAACGCC
TTCGAGCCGG AACCGATGGT GGAGGGGCTG AAGCTCGTCG GCGGCGAACC GGAGCGGATG
ACGCCGGCGC GCGCCCGGGT GCTCGATACC GCCTCCGACG GCTTTTCCTG GACACGCAGC
GGCCTTGCGC ATGCGGCGGG TGTCTCGACG AGTGTCGTCG ACGGGCTAAT CACGCTCGGC
ATTTTTGAGG CGATATTCCT GCCGCCGCCG CCGGTCGTTG CGATGCCGGA TCCGGATTTC
GCCGCCGCAC GTCTCGAAGG GCCGCAGAAG CAGGCGGCAG AAGAGATCGT TGCCGATGTC
CGCAAGGGCG AATTTTCGGT GTCGCTGATC GACGGGGTAA CCGGCTCCGG CAAGACCGAG
GTCTATTTCG AGGCGATTGC CGAGACGCTG AAACGCGGTA AGCAGGTGCT GATTCTGCTG
CCGGAGATCG CGTTGACGGC CAGTTTCATG GAGCGCTTCC AGGACCGCTT CGGGGCAAAG
CCTGCCGAAT GGCATTCCGA TCTTGCGCCG CGCATGCGTG AAAAGGTCTG GCGCCAGGCG
GTGACCGGCG AAGTGCGGGT GGTGGCCGGC GCTCGCTCGG CGCTCTTCCT GCCCTTCGAG
GATCTCGGCC TGATCATCGT CGACGAGGAA CACGATCCCG CTTACAAGCA GGAGGATCGC
GTCTTCTACA ATGCTCGCGA CATGGCCGTC GTGCGCGGCC GCATCGGTGA TTTTCCCGTC
ATTCTGGTGT CGGCGACGCC GTCGGTCGAA AGCCAGGTCA ACGGGCAGAG CGGACGCTAC
AGCACCGTCC ACCTGCCGAC GCGTTTCGGC GATGCGGCGA TGCCGGACCT GCATCTGGTC
GATATGCGCA GGCACGCGCC GGAGCGGGGC GGCTTCCTGT CGCCTGTGCT GATCCGGGCG
ATCGGCAAGA CGGTGGACAA GCGCGAACAG GCGCTGCTGT TTCTCAACCG GCGCGGTTAT
GCGCCGCTGA CGCTCTGCCG GGTCTGCGGC CATCGGTTCC AATGCCCGCA ATGTTCGAGC
TGGCTGGTCG AGCATCGTTT CCGCAAGCAG CTGCAATGCC ATCAATGCGG CCATGCCGAG
CGCACGCCCG AGGCATGCCC AGAATGCGGC ACGCTCGACC ATCTCGTCGC CTGCGGGCCA
GGCGTCGAGC GCATCGCGGA GGAGGTGGAA CGGCATTTTC CGGAGGCGCG GACGATCGTT
CTCTCCTCGG ATATCATGGG TGGGGTGAAG CGGCTGCGGC TGGAGCTGGA AGCGATCGCC
AAGGGCGAGG CCGATATCGT TATCGGCACC CAGCTTGTGG CAAAGGGGCA CAATTTTCCG
CTGATGACGC TGGTCGGCAT CGTCGATGCC GATCTCGGCC TTGCCAATGG CGACCCGCGC
GCGGCCGAAC GCACCTTCCA GCTCTTGTCG CAGGTGACGG GCCGGGCCGG GCGCACCGGC
CTCAAGAGTC ATGGGTTGCT GCAGACCTAT CAGCCGCAGC ATCCTGTCAT GCAGGCAATT
GTCTCCGGCG ATTCCGACGC TTTCTACGAG CGCGAGATCA CCGAACGCGA ACGCGCCATA
TTGCCGCCTT TCGGTAGGCT GGCGTCGATC ATCGTTTCGG CCGAAACCCG CCACGACGCA
GAAAACCATG CGCGCGGCAT GCGCAACGCC GCACCGCAGG TGTCAGGTAT CTCGGTGCTC
GGTCCGGCCG AAGCGCCGCT CGCGCTGGTG CGCGGCCGCC ACCGCTTCCG TCTTTTGGTC
CACGGCCGGC GGAACTCGGA CATGCAGGGC TTTCTGCGGG CGATGCTCTC ACAATCGCCC
AAAGAGCGTG GATCGGTGCA GGTGCAGCTG GATATCGATC CGCAGAGTTT TCTCTAA
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| Protein sequence | MSTDSSDLFG ALFEAPPANR TVPVLVPMPA PKPYSYSVPD GMAVEPGSVV QVPLGPRQVI
GVVWDGGEDG VDPKKLRPIS HVFDCPPLAR EMRDFIDWVA TYTLSPPGLV ARMALRAPNA
FEPEPMVEGL KLVGGEPERM TPARARVLDT ASDGFSWTRS GLAHAAGVST SVVDGLITLG
IFEAIFLPPP PVVAMPDPDF AAARLEGPQK QAAEEIVADV RKGEFSVSLI DGVTGSGKTE
VYFEAIAETL KRGKQVLILL PEIALTASFM ERFQDRFGAK PAEWHSDLAP RMREKVWRQA
VTGEVRVVAG ARSALFLPFE DLGLIIVDEE HDPAYKQEDR VFYNARDMAV VRGRIGDFPV
ILVSATPSVE SQVNGQSGRY STVHLPTRFG DAAMPDLHLV DMRRHAPERG GFLSPVLIRA
IGKTVDKREQ ALLFLNRRGY APLTLCRVCG HRFQCPQCSS WLVEHRFRKQ LQCHQCGHAE
RTPEACPECG TLDHLVACGP GVERIAEEVE RHFPEARTIV LSSDIMGGVK RLRLELEAIA
KGEADIVIGT QLVAKGHNFP LMTLVGIVDA DLGLANGDPR AAERTFQLLS QVTGRAGRTG
LKSHGLLQTY QPQHPVMQAI VSGDSDAFYE REITERERAI LPPFGRLASI IVSAETRHDA
ENHARGMRNA APQVSGISVL GPAEAPLALV RGRHRFRLLV HGRRNSDMQG FLRAMLSQSP
KERGSVQVQL DIDPQSFL
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