| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3918 |
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| Symbol | rocD |
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| ID | 8014736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 3991466 |
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| End bp | 3992665 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826488 |
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| Product | ornithine--oxo-acid transaminase |
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| Protein accession | YP_002977699 |
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| Protein GI | 241206603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTT CGGAAAAACT GATCGCCACT GAACAACGGC TCGGCGCCCA TAACTACAAG
CCGCTCGACG TGGTGCTGAC GCGTGGCGAA GGTGTTTATG TCTGGGATAC CGACGGCAAC
CGTTATCTCG ATTGCCTCTC GGCCTATTCC GCCGTCAACC AGGGCCACTG CCATCCGAAA
ATCCTTGCCG CCATGGTCGA ACAGGCAGGC AGGCTGACGC TCACCTCCCG CGCCTTCCGC
AACGATCAAC TTGCCTATCT CTACGAAGAA CTCGCGGCTC TCACCGGCTC GCATAAGATC
CTGCCGATGA ATTCCGGCGC CGAAGCGGTG GAGACCGCCA TCAAGGCGGT GCGCAAATGG
GGTTACGAGG TCAAGGGTGT GCCGGAGGGC AAGGCGGAGA TCATCGTCTG CGCCGATAAT
TTTCATGGCC GGACGCTGAG CATCATCAGC TTCTCGACGG ATCCCGAGGC CCGCAGCGGT
TTCGGCCCCT ACACGTCAGG TTTCCGCATC ATTCCGTTCG GCGATGCCGA GGCTTTCGCC
GCCGTAATCA ACAGAAATAC CGTGGCCGCC TTGATCGAAC CGATCCAGGG GGAAGCCGGC
GTCATCATTC CGCCGGCGGG TTATTTCACC CGCATCCGCG AGCTTTGCAC GGCAAACAAC
GTCACTCTTA TCCTCGATGA GATCCAGACC GGCCTCGGCC GCACCGGCAA GCTGCTGGCC
GAGGAGCACG AAGGCATCGA GGCAGACGTG ACGCTGATCG GCAAGGCGCT ATCCGGCGGC
TTCTATCCGG TGTCGGCCGT GCTTTCGAAT TCCGAAGTTC TGGGCGTGCT GAAGCCCGGC
CAGCACGGCT CGACCTTCGG CGGCAATCCG CTCGCCTGCG CGGTGGCCCG CGCAGCACTC
AAGGTGCTGA CGGAAGAGGG CATGATCGAG AACGCCGCCG TTATGGGCGA CTATTTCCTC
GAAGGCTTGA GGTCGATCCG CTCGAACATC GTCAGGGACG TCCGCGGCCG CGGCCTGATG
ATGGCCATCG AGCTGGAACC CGAAGCCGGC GGCGCGCGGC AATATTGCCA TGCGCTGAAG
GAGCGCGGCC TTCTCGCCAA GGACACCCAC GACCACACAA TTCGCCTCGC TCCGCCACTG
GTCATATCTA GAGAGCAGGT CGATTGGGCG GTCTCGCAGA TCGAAGAGAC GATAAGCTGA
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| Protein sequence | MNTSEKLIAT EQRLGAHNYK PLDVVLTRGE GVYVWDTDGN RYLDCLSAYS AVNQGHCHPK
ILAAMVEQAG RLTLTSRAFR NDQLAYLYEE LAALTGSHKI LPMNSGAEAV ETAIKAVRKW
GYEVKGVPEG KAEIIVCADN FHGRTLSIIS FSTDPEARSG FGPYTSGFRI IPFGDAEAFA
AVINRNTVAA LIEPIQGEAG VIIPPAGYFT RIRELCTANN VTLILDEIQT GLGRTGKLLA
EEHEGIEADV TLIGKALSGG FYPVSAVLSN SEVLGVLKPG QHGSTFGGNP LACAVARAAL
KVLTEEGMIE NAAVMGDYFL EGLRSIRSNI VRDVRGRGLM MAIELEPEAG GARQYCHALK
ERGLLAKDTH DHTIRLAPPL VISREQVDWA VSQIEETIS
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