| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3897 |
|---|
| Symbol | |
|---|
| ID | 8014717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3965351 |
|---|
| End bp | 3966514 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644826467 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_002977679 |
|---|
| Protein GI | 241206583 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00269559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTT TGAACAGAGC CGCGGAGTTG CAGGACGAGG TCGCCGAATG GCGCCGCCAC
ATCCACGCCC GGCCCGAACT CCTCTTCGCG GTGGAAAACA CGGCCGCCTT CGTCGCCGAA
AAACTCAAGG AATTCGGCGT CGACGAGATC GTCACCGGCA TCGGCCGCAC CGGTGTCGTC
GGCCTGATCA AGGGCAAGGG CGAAGGCTCC CGCACGGTCG GCCTGCGCGC CGACATGGAC
GCCCTGCCGC TGACTGAGAT CACCGGCAAG CCCTGGGCCT CGAAGACGCC GGGCAAGATG
CATGCCTGCG GCCATGACGG CCACACCGCC ATGCTGCTCG GCGCCGCGAA ATACCTGGCC
GAGACCCGCA ACTTCAACGG CAATGTTGCC GTTATCTTCC AACCCGCCGA AGAAGGCGGC
GGCGGCGGCA ATCTGATGGT CAAGGACGGC ATGATGGAGC GCTTCGCTAT CGAAGAGGTC
TACGGCATGC ACAATCTGCC GGGCCTGCCT GTCGGCCAGT TCGCCACCCG CAAGGGCGCG
ATCATGGCGG CGACCGACGA ATTCACCGTC ACCGTCAAGG GCCGCGGTGG CCACGCCGCC
CAGCCGCATA AGACGATCGA CCCGATCGCC ATCGGCGCCC AGATCATCGC CAATTTGCAG
ATGATCGCCT CGCGCACCGC CGATCCGCTG CGCTCGGTCG TCGTCTCGGT GACCAAGTTC
AATGCCGGCT TCGCCCATAA CGTCATTCCG AACGATGCGA CCTTCGCCGG TACGGTCCGC
ACCCTCGACC CGGAGGTGCG CACACTTGCC GAGACGCGGT TCCGGCAGAT CATCGAGGGA
CTGGTCGCGG CCCACGGCGC CGAGGCCGAC ATCAGCTTCC ACCGCAACTA TCCCGTCACC
GTCAACCATC CCGATGAGAC CGAGCATGCG GTCGCCACCG CCAGCGCCAT CGCCGGCGAA
GGCAACGTCA ACGCCGAGAT CGATCCGATG ATGGGCGGCG AGGATTTCTC CTATATGCTG
AACGCCCGTC CCGGCGCCTT CATCTTCATC GGCAACGGCG ACAGCGCCGG CCTCCACAAC
CCGGCCTACG ACTTCAACGA CGAAGCCATC GCCCACGGCA TCTCCTATTG GGTCCGCCTC
GCCGAACAAC GCCTTGGCCT TTAG
|
|---|
| Protein sequence | MPILNRAAEL QDEVAEWRRH IHARPELLFA VENTAAFVAE KLKEFGVDEI VTGIGRTGVV
GLIKGKGEGS RTVGLRADMD ALPLTEITGK PWASKTPGKM HACGHDGHTA MLLGAAKYLA
ETRNFNGNVA VIFQPAEEGG GGGNLMVKDG MMERFAIEEV YGMHNLPGLP VGQFATRKGA
IMAATDEFTV TVKGRGGHAA QPHKTIDPIA IGAQIIANLQ MIASRTADPL RSVVVSVTKF
NAGFAHNVIP NDATFAGTVR TLDPEVRTLA ETRFRQIIEG LVAAHGAEAD ISFHRNYPVT
VNHPDETEHA VATASAIAGE GNVNAEIDPM MGGEDFSYML NARPGAFIFI GNGDSAGLHN
PAYDFNDEAI AHGISYWVRL AEQRLGL
|
|---|
| |