Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3860 |
Symbol | |
ID | 8014684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3930727 |
End bp | 3931995 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644826430 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002977642 |
Protein GI | 241206546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0818449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCATT TCGAGTACCG CGACGGCGTC CTTCATGCGG AGAACGTCCC CGTTCCCGAG ATCGCCAAGG CGGTCGGCAC CCCTTTCTAC GTCTACTCCA CCGCGACGCT GGAGCGCCAT TACCGCGTCT TTTCGGAAGC CTTCGCCGAC ATGGACTCCA TGGTCTGCTA TGCGATGAAG GCGAATTCGA ACCAGGCGGT GCTGAAGACG CTGGGCCGCC TCGGCGCCGG CATCGATGTC GTCTCTGAGG GCGAACTGCG CCGCGCGCTT GCCGCCGACA TTCCAGCGAG CCGCATCATG TTCTCAGGTG TCGGCAAGAC GCCGTCCGAG ATGGATTTCG CCCTCGAAGC CGGTATCTAC TGTTTCAACG TCGAATCCGA GCCCGAGCTC GAGATCCTCA ATCAGCGCGC CGTCAGCGCG GGCAAGAAAG CGCCGGTCTC CTTCCGCATC AACCCTGATG TCGATGCGAA GACGCATTCC AAGATCTCGA CCGGCAAGAA GGAAAACAAG TTCGGCATCT CCTGGGAGCG CGCCCGCGCC ATCTATGCCC ATGCCGCCAA GCTGCCGGGC ATCGAGGTCA CCGGCATCGA CATGCATATC GGCAGCCAGA TCACCGAATT GCAGCCCTTC GACGACGCCT TCAAGCTGCT GCACGACCTT GTCGCGACGC TGCGCGCCGA CGGCCACACC ATCCATCACG TCGATATCGG CGGCGGCCTC GGTATCCCCT ACAAGGACGA CAACAATCCG CCGCCGCTGC CGGACGCCTA TGCGGCAATC GTCAAGAACC AGCTGCGCGG TCTAAACTGC AAGATCATCA CCGAACCCGG ACGCCTGATC GTCGGCAATG CCGGCATCCT CGTGACCGAG GTCCTCTATG TGAAGGATGG CGGCGAAAAG ACCTTCGTCA TCGTCGACGG CGCGATGAAC GATCTCATCC GCCCGACGCT TTACGAGGCC TATCACGAGA TTCGGCCGGT AACGATTTCG GCGGCCAACG CGCCGCGCAT CCGCGCCGAT GTCGTCGGCC CCGTTTGCGA GACCGGCGAC TATCTGGCGC TCGACCGCGA GATGGCGATG CCGAAGCCCG GCGACCTGAT GGCCGTCAGC ACCGCCGGCG CCTACGGCGC AGTCCAGGCC GGCACCTATA ACAGCCGGCT GCTGGTGCCC GAAGTTCTGG TCAGGGGCAG CGATTTCCAC ACGATTCGAC CGCGTAGAAC CTATGCCGAA CTGATCAGCC TCGACTCCGT TCCGGCCTGG CTCGACTGA
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Protein sequence | MNHFEYRDGV LHAENVPVPE IAKAVGTPFY VYSTATLERH YRVFSEAFAD MDSMVCYAMK ANSNQAVLKT LGRLGAGIDV VSEGELRRAL AADIPASRIM FSGVGKTPSE MDFALEAGIY CFNVESEPEL EILNQRAVSA GKKAPVSFRI NPDVDAKTHS KISTGKKENK FGISWERARA IYAHAAKLPG IEVTGIDMHI GSQITELQPF DDAFKLLHDL VATLRADGHT IHHVDIGGGL GIPYKDDNNP PPLPDAYAAI VKNQLRGLNC KIITEPGRLI VGNAGILVTE VLYVKDGGEK TFVIVDGAMN DLIRPTLYEA YHEIRPVTIS AANAPRIRAD VVGPVCETGD YLALDREMAM PKPGDLMAVS TAGAYGAVQA GTYNSRLLVP EVLVRGSDFH TIRPRRTYAE LISLDSVPAW LD
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