| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3850 |
|---|
| Symbol | |
|---|
| ID | 8014675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3922780 |
|---|
| End bp | 3923613 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644826420 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002977632 |
|---|
| Protein GI | 241206536 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.854868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAG CGCGCACCAT CGTCGTGACC GGATGTTCGT CCGGTATCGG CGCTCATTGC
GCACGGGCGC TGAAAGCCGA TGGCTGGCGT GTCTTCGCAA CGGTGCGCAA GCCGGACGAT
CTCAAGGGGT TGGAAGCGGA AGGCATCGAA GCCTTCCTGA TGGACTATGC CAGGACCGAG
ACGATTTCCG AGCTGGTCGG CACGGTTCTG GAACGCAGCG GCGGTCGCAT CGACGCGCTC
TTCAATAACG GCGCCTACGG CCAGCCGGGC GCTGTCGAGG ATCTGTCGAC GGCAACGCTG
CGCGCGCAGT TCGAGGCGAA TTTCTTCGGC TGGCATGAAC TGACGCGGCA GGTCCTTCCG
CCGATGCGCA AACGTGGCCA AGGGCGGATC GTGCAATGTT CGTCGATCCT CGGCGTCGTC
CCCTATCGCT TTCGCGGCGC CTACACCGCG TCCAAATTTG CACTCGAAGG CCTCAGCATC
ACCCTACGCA TGGAGCTGCA GGGCAGCGGC ATCCATGTGA GCCTGATCGA GCCGGGACCG
ATCGCCTCGC GGTTCACCGC CAATGCGCTC GCAAAGATCA AGGAACATAT CGACCTCGAG
AATTCGCCTC ACGCGGTCGA TTACATCAGC CAATTGGCGA GACTCGACGG ATCGGGGCCG
GTCAACCGCC ATAAACTCGG CCCGGAAGCG GTCTATTCCG TGTTGAAACA CGCATTGAAC
TCGAAAAATC CGAGGCCACA TTATCCCGTA ACGACTCCGG CTAAACAGGG CATGTTCCTG
AAGCGGCTGC TTCCGGCAGA CCTCTTCTAC CGCCTGATGC GCTGGACAGA CTGA
|
|---|
| Protein sequence | MAGARTIVVT GCSSGIGAHC ARALKADGWR VFATVRKPDD LKGLEAEGIE AFLMDYARTE
TISELVGTVL ERSGGRIDAL FNNGAYGQPG AVEDLSTATL RAQFEANFFG WHELTRQVLP
PMRKRGQGRI VQCSSILGVV PYRFRGAYTA SKFALEGLSI TLRMELQGSG IHVSLIEPGP
IASRFTANAL AKIKEHIDLE NSPHAVDYIS QLARLDGSGP VNRHKLGPEA VYSVLKHALN
SKNPRPHYPV TTPAKQGMFL KRLLPADLFY RLMRWTD
|
|---|
| |