Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3846 |
Symbol | |
ID | 8014671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3919574 |
End bp | 3920131 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644826416 |
Product | HNH endonuclease |
Protein accession | YP_002977628 |
Protein GI | 241206532 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.895408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGATTG CAGTCTCCCC ACAGGCCCTG CCGGCGCTCG TTCTGAACGC TGACTACCGG CCGCTGAGTT ATTACCCCTT GTCGTTGTGG TCCTGGCAGG ACGCGATCAA GGCGGTATTT CTCGACCGTG TGAACATCAT TGCAGAATAT GAACATTCGG TTTCTTCGCC GAGCTTTTCG ATGCGGCTTC CGAGTGTCGT GTGCCTGAAG ACTTACGTTC AGCCGTCCCG CAATCCCGCG TTCACCCGGT TCAACGTCTT CCTGCGCGAC CGGTTCGAAT GCCAGTATTG CGGCGCCCAT GACGACCTGA CCTTCGACCA CGTCATCCCG CGCGCCCATG GCGGCGAGAC CACCTGGGAG AATGTCGTGG CAGCCTGCTC GCCTTGCAAT CTGCGCAAGG GCAGCAAGCT TCCGAAGCAG GCAAGCATGT TCCCGGCGCA GAAGCCCTAT CAGCCGACGG TGCAGGATCT GCACAATAAC GGCCGGCTGT TCCCGCCGAA CTACCTGCAT GAAAGCTGGC TCGACTATCT CTATTGGGAT ACCGAACTGC AGCCCTGA
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Protein sequence | MTIAVSPQAL PALVLNADYR PLSYYPLSLW SWQDAIKAVF LDRVNIIAEY EHSVSSPSFS MRLPSVVCLK TYVQPSRNPA FTRFNVFLRD RFECQYCGAH DDLTFDHVIP RAHGGETTWE NVVAACSPCN LRKGSKLPKQ ASMFPAQKPY QPTVQDLHNN GRLFPPNYLH ESWLDYLYWD TELQP
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