| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3812 |
|---|
| Symbol | |
|---|
| ID | 8014641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3882038 |
|---|
| End bp | 3883960 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644826381 |
|---|
| Product | Peptidase M23 |
|---|
| Protein accession | YP_002977594 |
|---|
| Protein GI | 241206498 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCT CGTTGGGCAA CGAGCCTCCG CTTCTGGCAG ACGGCAGACG CGCGCCCGAC
CGGCGCGAAG TTTCCTTGCG CTGGCTCTCG GGCACGTTCC TCACAGGCAT TACATCATCC
GTCCTGATGG GTGTCGCCCT TTTTGCCGCC CTTGATGGCC GCCAGCAATT GGCGATCCCC
GCCGAAGCCT ATGCAAGTGT TGCGGCGGAC GCGCATGAGG ATACGACAGT GGTCCGCGGT
GGCCGGCTGA TCGCGCCCGC CATCGCCGCA AAACCGTCCG ACCGTGCCAT TATGGAAGTC
TCAACCGTCG TCCACGACGG CGAAAAGGAA GTCGTCCGCC GCCAGCCCTT CGCGCATGTG
AAGATGACGC TGGCCGCCAA CCATGTGGCG ACGGAGGACT ATCCGGACTT CGATCCTCTG
GCGATCTTTT CCGCCGACGA GCCGCAGCCC GCGCCGCAAA GCCGCACAGG CGCGCTTTAC
GGCTCCGACG TCGAATCCGA AGTCAGCCTG AAGACCATTC CCTTCCCGAC CGGCAAGACC
AGCATGCAGA TGGCATCCGG CCTGTCGCTC GAGGAGGTCG AAGAGAATGT GCGCTCCAAC
GGCTCGGTGC TGACCGACGG CAACACGCAG CTCGCAGCCC TTTATTACGT CGATCCGCGT
CGTTTCTCCA ACGAGGATGC CGATGTCGAT CTGACCGCCG GTCTGTCCGC CCGCGTGCTC
GAACAGAACA TGACGGTCTC CGCATCGGAA TCGATCACGC CGCAGACCGA AGAATTCGCC
GACGACATCC TGCCGGTGCG CGTCGACACG CCCATCGCCA AGGCGCTGAC GGATTCAGGC
TATCCGCAGC AATATGCCGA TGGCATCGCC GGCTATATCG CGCAGCAACT GGGTTCTGGT
GATCTCGACA AGGGCGATGT GCTGCGCATC GGCATCATTC AGAAGGGCGA ACAGGCAAAG
ATCATCCGAG CCAGCGTCTA TCGCGGCACG CGCCATCTCG TCACCGTAGC CGTCGACGAC
AAGGGCAGAT ATGTGCCCGG CAGCGAGCCG CCGATGTTGG ATGCCATCGC CACCGCCTTC
GATGACAATT CGTTCGCACC GCCCCCCGGC CAGAACCTGC CGCGCGTCTA TGACGGCATC
TATCGTGCTG CCCTTTCCTA CGGCATGACC AAGGATATGA CGGCGCTGAT CATCAAGCTG
CTCGCCAGCA ATGTCGATTT TCAGGCGCAG TTGAGGCCGA CCGACAGTCT CGAAGCCTTC
TTCTCCGTCG CCGACAGCGC TGGTCAGGCG ACCGAGGATT CCGAACTGCT CTATGTCAAC
GCCCGTTTCG GCGATACGCA GACGCGCTTC TACCGCTTCC AGGACCCCGA AGACGGCACG
GTCGATTATT TCGACGAGAA CGGCAAGAGC ATCCGCCAGT TCCTGCTGCG TAACCCGGTT
CCGAACGGCA TCTTCAAATC GGGCTTCGGC ATGCGCCGCC ATCCGATCCT CGGTTTTGCC
CGCATGCACA CCGGCGTCGA TTGGGCTGCA CCGCGCGGCA CGGCGATCAT CGCCGCCGGC
AACGGCACGG TCGAAAAAGC CGGCTGGGAT TCCGGCGGTT ACGGCAACCA GACGATCGTG
CGCCATGCCA ACGGCTATGA ATCCTCCTAC AATCACCAGA GCGCCATCGC CAAGGGCGTC
GTCCCCGGTG CCAAGATCCG CCAGGGCCAG GTGATCGGCT GGGTCGGTAC GACGGGCGAA
TCCACCGGCC CTCACCTGCA TTACGAGCTG ATCGTCAACG GCACCAAGGT CGATCCGCTG
CGCATCCGCC TGCCGGGCGG CAAATCGCTG CAGGGCGAGG CGCTGGCGAA ATTCGAAGAC
GAGCGCAAAC GCATCGATAC GCTGCTCAAC AACCAGACGC CGGACCAGGT GGCGAGCAAG
TAG
|
|---|
| Protein sequence | MIRSLGNEPP LLADGRRAPD RREVSLRWLS GTFLTGITSS VLMGVALFAA LDGRQQLAIP
AEAYASVAAD AHEDTTVVRG GRLIAPAIAA KPSDRAIMEV STVVHDGEKE VVRRQPFAHV
KMTLAANHVA TEDYPDFDPL AIFSADEPQP APQSRTGALY GSDVESEVSL KTIPFPTGKT
SMQMASGLSL EEVEENVRSN GSVLTDGNTQ LAALYYVDPR RFSNEDADVD LTAGLSARVL
EQNMTVSASE SITPQTEEFA DDILPVRVDT PIAKALTDSG YPQQYADGIA GYIAQQLGSG
DLDKGDVLRI GIIQKGEQAK IIRASVYRGT RHLVTVAVDD KGRYVPGSEP PMLDAIATAF
DDNSFAPPPG QNLPRVYDGI YRAALSYGMT KDMTALIIKL LASNVDFQAQ LRPTDSLEAF
FSVADSAGQA TEDSELLYVN ARFGDTQTRF YRFQDPEDGT VDYFDENGKS IRQFLLRNPV
PNGIFKSGFG MRRHPILGFA RMHTGVDWAA PRGTAIIAAG NGTVEKAGWD SGGYGNQTIV
RHANGYESSY NHQSAIAKGV VPGAKIRQGQ VIGWVGTTGE STGPHLHYEL IVNGTKVDPL
RIRLPGGKSL QGEALAKFED ERKRIDTLLN NQTPDQVASK
|
|---|
| |