| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3809 |
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| Symbol | |
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| ID | 8014633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 3867743 |
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| End bp | 3870913 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644826372 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002977591 |
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| Protein GI | 241206495 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0639553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGC GTTTCTTCAT CGAGCGACCG ATACTCGCCA ATGTTCTGGC GTTGGTTTTC
GTGCTCATCG GCGCGGTGGC GCTGTTCCAG CTGCCTGTGG CGCAATATCC GAATGTCGTT
CCGCCAACGG TGCAGGTGAC GACGCGCTTC CCGGGCGCCA GCGCACAGAC CCTCGTCGAT
ACCGTCGCGC TGCCGATCGA ACAACAGGTC AACGGCGTGC AGGACATGCT CTATATGCAG
TCGACGAGCG CAAGCGACGG CACCTATTCC CTGACCGTGA CCTTTGCCAT CGGAACGGAT
CCGGACCAGG CCCAGGTTCT GGTGCAAAAC CGCGTCGCCA TAGCAATGTC ATCGCTTCCC
GAAGCGGTGC AGCTTCAGGG CGTGACGACG CAAAAGAAGT CGACGGCGAT CCTCGGCTTC
GTCAGCCTGA CCTCGCCCGA CAGCCGCTAT GACAGCCTGT TCTTGTCGAA CTACGCCGTC
ATCAATCTTC AGAATGAACT CGCCCGCCTG CCGGGTGTCG GCAATGTCAC CGTGTTCGGG
GCCGGCCAAT ATGCCATGCG CATCTGGATG GATCCGAACC TGCTGCAGGC GCGCGGCCTG
ACGCCGCAGG ATGTGGTCAG CGTCGTGCAG CAGCAAAGCC AGGAGGTGGC CGCCGGCCAG
ATCGGCATTC CGCCGGTACC GAAGGGACAG GTCTTCCAAT ACACGCTGAA CGTCAATGGC
CGATTGAACG AGGCGGCCGA CTACGAAAAC ATCGTCGTCA AGGTCGAGAG CGGACAGGGC
GGCCGTGTTA CCCGGATCCG CGATATCGGC CGCGTCGAAC TCGGCGCCCA GACTTACCGT
CAGTCCTTCA TGCAGAACGG CCGGCCGGCT GCCGGCATCG GCATTTTTCA GCTGCCGGAG
GCAAATGCCA TCGCGGTGGC GCAGGTGGTG AACACGAAAA TGCAGGAGCT CTCGAAGAGC
TTCCCGCCGG GCCTCGAATA TCACGTGCCG TTCGACACGA CAAAATTCGT CGAGGCCTCC
ATCGACGAGG TTTACGTCAC CTTGATCGAG GCCGGCATTC TCGTTCTCAT CGTCATTCTC
GTGTTCCTGC AGGATTGGCG GGCGATGCTC GTGCCGGCGA CCACCGTTCC GGTCACCATC
ATCGGCGCCT TCGCGGCCAT GGCAGCATTG GGTTTCACCG TCAACCTGTC GACGCTGTTT
GCCATCGTTC TCGCCATCGG TATCGTCGTT GATGATGCCA TCGTCATTGT CGAAGGGGTC
GCCCGACACA TCGAGGCCGG CATGTCCGGC CGAAAGGCGG CCGAAAAGGC GATGGAGGAG
CTGCTTGGCC CGGTCATCGG CATTACGCTG GTGCTGATGG CCGTTTTCAT TCCGGCCGCC
TTCCTGCCCG GCCTGACCGG ACAGCTCTAC CGGCAGTTCG CCCTCGTCAT CGCCGCCACG
GCACTGATCA GCGCCATCAA TGCCGTCACG CTGAAACCGA CGCAATGTGC CCTTTGGCTG
CGGCCACCAG TCCCGCCAGA GAAACGCAAC ATCTTCTATC GCGGCTTCAA CAAGGTCTAC
GACAGGGGTG AACGCAGCTA TGCCGGGCTG ATCGGATCGA TGACCCGCCA CAGCGGTATC
ATGGTCATAG CAGCACTTGC GCTGATCGGT GTCGCCGTCT GGGGGCTCGC CCGTCTGCCG
ACTGCGTTTC TGCCCATCGA GGATCAAGGC TATGTGCTGA TCAGTGCGCA GCTGCCCGAC
GGCGCATCGA AGGAGCGCAC CGACGCGGTG ATGGAAGAGG TCGGCAAGAT CGCCGAAGCC
ACGCCTGGCG TCGATCAGGT GCTGACCATC AGCGGCATCT CCGTTCTCGA CAACAATGCC
AGTCTGCAGA ATGCCGGCGT CGCCTATGTC GTGCTGAAGG ATTGGGACGA GCGCGGCAAG
GAAAAGGGGC AGGATCTGCT GTCGATCTAC CAGCATTTGA ACGGCACGCT GCAAAGCGTG
CTCGCCGCCA AGACGCTGGT GGTCGTGCCA CCTCCGATCC AGGGCGTCGG CAATGCCAGT
GGCTTTACCA TGCAGGTCGA GATCAGGAAC GGCATTTCCG ACTACCCGCT GCTGCAATCG
CTTGCCGACA CGATCGTCAA GAACGGCGGT GCTCAGTCAT CCCTGCAAAG GCTGAGCACG
CCTTTTCGCT CGAACGTGCC GCAACTCGCA GTCTCTGTCG ACCGGATCAA GGCGGAGACG
CTAGGGGTTA CCGTGGGCCA GGTTTTCTCG GCTCTCTCCA GTTACGTCGG ATCGAGCTAT
GTCACCCAGT TCAACAAATT TGGCCGGACC TTCCAGGTCT ATGCGCAAGC CGCTTCCGAT
TTCCGGGTCA GCGCCGAAGA CATCCGCAAT CTGAAGGTCA AGGCCGGTGA CGGCACGATG
GTGCCGCTCG GCACGGTCGT CGATGTCACC GCGACACAAG GCCCATCTCT GATCAGCCTC
TACAATCTCT ACCCGTCTGC AACGATCGTT GGCGGGCCTG CCGCAGGCTT CAGTTCCGGC
CAGTCGCTCG ACGTCATGGA GCAGATTGCC GATCAGACAC TGCCACCGGG CACAGGCTTC
GAATGGACGG CGCTGTCCTA TCAGGAGAAG GCCGTGGGCG GGCAGATCTA TTTCATCTTC
GCGCTCGCCA TGCTCCTCGT CTATTTCGTG CTCGCAGGCC AGTATGAAAG CTGGATCTTG
CCGCTGGCAG TCCTTCTCGC CGTGCCGCTC GCCCTCCTTG GCACAGTGGC AGCGCTTATG
GCAGCCGGCG TTGCCAACAA CCTTTATACG CAGATCGGCC TTATCCTGCT GATCGCGCTT
GCATCGAAGA ATGCCATCCT CATCGTCGAA TATGCTAGGG AAAGGCGGGC GGAAGGCATG
GAAATACTGG ATGCGGCCGT CGAGGCCGCC CGCTTGCGTT TCCGGCCAAT TTTGATGACG
TCCTTCGCCT TTATCCTCGG CGTCCTGCCG CTCGTGCTGG CGACTGGCGC CGGCGCATCC
GCCCGCAAAT CTATCGGCAT ATCGGTCTTC AGCGGCATGA TCGCCTCGAC CTGCCTCGCC
GTGCTCTTTG TCCCGTCCTT CTACGTCCTG TTGCAGCGCC TCGAGGAATA TTGGAAAGGG
CGCACAAAGA CCGCAGGCCT GGCGGAAACG GAGATATCGA AGGTTCAGTA G
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| Protein sequence | MISRFFIERP ILANVLALVF VLIGAVALFQ LPVAQYPNVV PPTVQVTTRF PGASAQTLVD
TVALPIEQQV NGVQDMLYMQ STSASDGTYS LTVTFAIGTD PDQAQVLVQN RVAIAMSSLP
EAVQLQGVTT QKKSTAILGF VSLTSPDSRY DSLFLSNYAV INLQNELARL PGVGNVTVFG
AGQYAMRIWM DPNLLQARGL TPQDVVSVVQ QQSQEVAAGQ IGIPPVPKGQ VFQYTLNVNG
RLNEAADYEN IVVKVESGQG GRVTRIRDIG RVELGAQTYR QSFMQNGRPA AGIGIFQLPE
ANAIAVAQVV NTKMQELSKS FPPGLEYHVP FDTTKFVEAS IDEVYVTLIE AGILVLIVIL
VFLQDWRAML VPATTVPVTI IGAFAAMAAL GFTVNLSTLF AIVLAIGIVV DDAIVIVEGV
ARHIEAGMSG RKAAEKAMEE LLGPVIGITL VLMAVFIPAA FLPGLTGQLY RQFALVIAAT
ALISAINAVT LKPTQCALWL RPPVPPEKRN IFYRGFNKVY DRGERSYAGL IGSMTRHSGI
MVIAALALIG VAVWGLARLP TAFLPIEDQG YVLISAQLPD GASKERTDAV MEEVGKIAEA
TPGVDQVLTI SGISVLDNNA SLQNAGVAYV VLKDWDERGK EKGQDLLSIY QHLNGTLQSV
LAAKTLVVVP PPIQGVGNAS GFTMQVEIRN GISDYPLLQS LADTIVKNGG AQSSLQRLST
PFRSNVPQLA VSVDRIKAET LGVTVGQVFS ALSSYVGSSY VTQFNKFGRT FQVYAQAASD
FRVSAEDIRN LKVKAGDGTM VPLGTVVDVT ATQGPSLISL YNLYPSATIV GGPAAGFSSG
QSLDVMEQIA DQTLPPGTGF EWTALSYQEK AVGGQIYFIF ALAMLLVYFV LAGQYESWIL
PLAVLLAVPL ALLGTVAALM AAGVANNLYT QIGLILLIAL ASKNAILIVE YARERRAEGM
EILDAAVEAA RLRFRPILMT SFAFILGVLP LVLATGAGAS ARKSIGISVF SGMIASTCLA
VLFVPSFYVL LQRLEEYWKG RTKTAGLAET EISKVQ
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