Gene Rleg_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3786 
Symbol 
ID8014612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3843144 
End bp3844403 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID644826349 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002977568 
Protein GI241206472 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGT TTTTGAGCTC GGCAGCTGTT GCTGTCGTGA TGATGGCTGG CCTCAGTGCT 
GCCCACGCAG CCGACGTCAA GGAAGTGCAG ATGCTGCACT GGTGGACATC GGGCGGCGAG
GCGGCGGCAC TGAACGTTCT GAAGCAGGAT CTTTCGAAGG AAGGTTTTGC CTGGAAGGAT
GTGCCGGTTG CCGGCGGTGG CGGCGATGCG GCGATGACGG CGCTGAAGGC GATGGTTGCG
GCCGGCACCT ATCCGACAGC CTCGCAGATG CTGGGCTATA CCGTGCTCGA TTATGCTCAG
GCCGGGGTCA TGGGCGATCT GACGGAGACG GCGAAGAAGG AAGGCTGGGA CAAGTCGGTT
CCGGCAGCGC TGCAGAAGTT CTCGGTCTAT GACGGCAAGT GGGTCGCAGC CCCCGTCAAC
GTCCACTCGG TCAACTGGCT GTGGATCAAC AAGGCTGTGA TGGACAAGAT CGGCGGCACC
CAGCCGAAGA CCTTCGACGA GCTGATCGCC CTGCTCGACA AGGCGAAGGC CGCAGGCGTC
ATCCCGCTGG CTCTCGGCGG CCAGAACTGG CAGGAGGCGA CGATGTTCGA TTCCATCGTG
CTGTCGACCG GCGGGCCGGA GTTCTACAAG AAGGCCTTCA ACGACCTCGA CGAGGAATCG
CTGAAGTCCG ACACGATGAA GAAGTCGTTC GACAATCTGG CGACGATCAT CAAATATGTC
GACCCGAACT TCTCGGGCCG CGACTGGAAC CTGGCAACCG CCATGGTCAT CAAGGGTGAC
GCGCTAGTGC AGGTGATGGG CGACTGGGCC AAGGGCGAAT TCGTCGCCGC CAAGAAGACG
CCGGATACCG ACTTCCTGTG CTACCGCTTC CCCGGCACCG ACGGCAGCGT CGTCTACAAC
TCCGACATGT TCGGCATGTT CAACGTTCCC GACGACCGCA AGGCGGCCCA GGTGGCGCTG
GCGACCGCAA CGCTGTCGAA GAGCTTCCAG TCGGCCTTCA ACGTCGTCAA GGGTTCGGTG
CCGGCTCGTA CCGACGTTCC CGATACCGAC TTCGATGCTT GCGGCAAGAA GGGCATCGCC
GACCTGAAGG CAGCCAACGA AGGCGGCACG CTGTTCGGCT CGCTGGCACA GGGCTACGGC
GCTCCTCCGG CGATCGCCAA TGCCTACAAG GATGTCGTCT CGAAGTTCGT CCACGGCCAG
ATCAAGACCT CCGACGAAGC CGTCAAGCAG CTCGTCCAGG CGATCGACGA CGCCCGCTGA
 
Protein sequence
MNKFLSSAAV AVVMMAGLSA AHAADVKEVQ MLHWWTSGGE AAALNVLKQD LSKEGFAWKD 
VPVAGGGGDA AMTALKAMVA AGTYPTASQM LGYTVLDYAQ AGVMGDLTET AKKEGWDKSV
PAALQKFSVY DGKWVAAPVN VHSVNWLWIN KAVMDKIGGT QPKTFDELIA LLDKAKAAGV
IPLALGGQNW QEATMFDSIV LSTGGPEFYK KAFNDLDEES LKSDTMKKSF DNLATIIKYV
DPNFSGRDWN LATAMVIKGD ALVQVMGDWA KGEFVAAKKT PDTDFLCYRF PGTDGSVVYN
SDMFGMFNVP DDRKAAQVAL ATATLSKSFQ SAFNVVKGSV PARTDVPDTD FDACGKKGIA
DLKAANEGGT LFGSLAQGYG APPAIANAYK DVVSKFVHGQ IKTSDEAVKQ LVQAIDDAR