| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3783 |
|---|
| Symbol | |
|---|
| ID | 8015851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3839988 |
|---|
| End bp | 3841103 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644826346 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002977565 |
|---|
| Protein GI | 241206469 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.256147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCC TCGAAATCTC CGGTCTCAAA AAGCGCTTCG GCGCAGTCGA CATTCTCAAG
GGGATCGACC TCGAACTCGA AAAGGGCGGC TTTCTCGTGC TGGTCGGCCC ATCCGGCTGC
GGCAAGTCCA CCCTGCTCAA CACCATTGCC GGGCTGGAGA CGATCACCTC AGGCGATATC
AAGATCGACG GGCGCGACAT CAGCGGCCTG CATCCCTCCA AGCGCGACAT CGCCATGGTG
TTCCAGTCCT ATGCGCTCTA TCCGAACATG ACGGTGGCGG GCAACATCGC CTTCGGCATG
GAGATCCGCG GTGTGCCGAA GGAGGAGCGC GCCAGGGCGA TCGCCCAAGT CTCCGACATG
CTGCAGATCG GCCATCTGCT CGACCGCAAG CCGAGCCAGC TCTCCGGCGG CCAGCGCCAG
CGTGTCGCCA TGGGAAGGGC GCTGGTGCGC AATCCGCAGG TCTTCCTGTT CGACGAACCG
CTCTCCAATC TCGACGCCAA GCTGCGCGTC GACATGCGCA CCGAGATCAA GCGGCTGCAT
CAGCGCATGG GCACCACCTT CGTCTATGTC ACCCACGACC AGATCGAGGC GATGACGCTG
GCGACCAAGA TCGCCGTACT GAAGGATGGC GTGCTGCAGC AGTTCGGCAC GCCGGCCGAG
ATCTATAACA GCCCCTCCAA CATCTTCGTC GCCGACTTCA TGGGCTCGCC GGCGATGAAC
CTGCTCAACG CCACCGTCGA GAACGGCGCC GGCGGCCTCG AAGTCTCGCT GGAGCGGCCG
AATGCCGCCC CGCTCCGACT GCCCGTCATC TCAGGCAATG ACGGCCTGAC CGCCTATACC
GGCAGACAGG TGATCTTCGG CATCCGGCCG GAGGCCTTGA CCGATCCCGA TGGCGCCGAC
CGCAAGGCGC GCTCGCTGAC CGAGGGCGAT TGCCTGATCG AGGTGGTCGA ACCGGCCGGC
TCCGATACCT TCGCCGTCAC CAAGCTCGGC GGTAAATCCG TCGTCGCCCG CCTGCGCGCC
GATACCGGCA TCGCGCCAGG ACAAAACACC CGCCTCGCAT TCAATCTCGA TAAGGCCGTC
TTCTTCGATC CCAGTAGCCA GCTCAGGATC GGGTGA
|
|---|
| Protein sequence | MAFLEISGLK KRFGAVDILK GIDLELEKGG FLVLVGPSGC GKSTLLNTIA GLETITSGDI
KIDGRDISGL HPSKRDIAMV FQSYALYPNM TVAGNIAFGM EIRGVPKEER ARAIAQVSDM
LQIGHLLDRK PSQLSGGQRQ RVAMGRALVR NPQVFLFDEP LSNLDAKLRV DMRTEIKRLH
QRMGTTFVYV THDQIEAMTL ATKIAVLKDG VLQQFGTPAE IYNSPSNIFV ADFMGSPAMN
LLNATVENGA GGLEVSLERP NAAPLRLPVI SGNDGLTAYT GRQVIFGIRP EALTDPDGAD
RKARSLTEGD CLIEVVEPAG SDTFAVTKLG GKSVVARLRA DTGIAPGQNT RLAFNLDKAV
FFDPSSQLRI G
|
|---|
| |