| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3773 |
|---|
| Symbol | |
|---|
| ID | 8014603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3828044 |
|---|
| End bp | 3828865 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644826336 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002977555 |
|---|
| Protein GI | 241206459 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.302075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG ACCACGGCCG CCTTGACGGC AAGATCGCCA TCGTCACCGG CGGCACGCAA
GGATTGGGCG CGACGATCGC CCGCCTCTTC GCCGAACGCG GTGCAAAAGG CATCGTCATC
TGCGGCCGCA ACGAAGCCAA GGGCAAGGCG AAGGCGGCGG AGATTTCGGC TGCGACCGGC
ACCAGGATCG TCTACGTCAA GTCCGACCTC GGCAAGGTCG AGGATGCACA GAATGTCGTG
CGCGCCTGCG ACGAGACCTT CGGTCGTGTC GATGCGCTGG TCAATGCCGC CGCCATCACC
GATCGCGGCA CCATCCTCGA CACCAGCCCG GAACTCTTCG ACGCAATGTT CGCCGTCAAT
GTTCGCGCGC CGTTTTTCCT GATGCAGGAA GCGGTGAAGG TCATGCGCCG CGAAAAGATC
GAGGGTACGA TCGTCAACAT CGGCTCGATG TCGGCCAAAG CCGGCCAGCC CTTCATCGCC
GCCTATTGCG CCTCCAAGGG CGCGCTGGAA ACGCTGACGA AGAACACCGC CTATGCGCTC
CTGCGCAACC GCATCCGCGT CAATGGTCTG AACATCGGTT GGATGGCCTC TGAAGGCGAG
GACCGCATTC AGCGCGAATA TCACGGCGCA CCGGCCGACT GGCTGGAGAA GGCGGCGGCA
AGCCAGCCCT TCGGCCGTCT CGTCGATCCG CACGAGGTGG CGCGCGCCTG CGCTTACCTG
TCGTCTTCCG AATCCGGCCT GATGACCGGC TCGGTCATCT GCTTCGACCA GTCGATCTGG
GGCGCTTACG ACGGCTCGCC GCATCCGGTC GCCGCCCTCT AG
|
|---|
| Protein sequence | MSTDHGRLDG KIAIVTGGTQ GLGATIARLF AERGAKGIVI CGRNEAKGKA KAAEISAATG
TRIVYVKSDL GKVEDAQNVV RACDETFGRV DALVNAAAIT DRGTILDTSP ELFDAMFAVN
VRAPFFLMQE AVKVMRREKI EGTIVNIGSM SAKAGQPFIA AYCASKGALE TLTKNTAYAL
LRNRIRVNGL NIGWMASEGE DRIQREYHGA PADWLEKAAA SQPFGRLVDP HEVARACAYL
SSSESGLMTG SVICFDQSIW GAYDGSPHPV AAL
|
|---|
| |