Gene Rleg_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3726 
Symbol 
ID8014564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3780112 
End bp3780924 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID644826289 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977508 
Protein GI241206412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.608354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCTG ACCTCAAGAC ATCGCCACTT GCGCTGAAGG TCGCCGCAGC CGGCGGGCTG 
CTCTTCCTGC ATCTGCCGAT CCTGCTGATC TTCGTCTATG CCTTCACGAC GGAGGAGAAG
AGCTATCAAT GGCCGCCGCC TGGCCTGACG CTGCAATGGT TCGAGGTCGC CTGGAACCGG
CCGGACGTCT GGTCGGCGCT CGGGCTTTCC GTGCAGGTCG CCGTCATCGC CACGGCGATC
GCGCTGGTCC TCGGCACGCT CTGTGCTGCA GCCGTCAGCC AGACGAAGTT CTTCGGCCGC
GAGGCGATCT CGCTGCTGGT CATCCTGCCG ATCGCCCTTC CCGGCATCAT CACCGGCATT
GCGCTCCGCT CCGCCTTCAG CCTGTTCGAC ATCCCGTTTT CGGTCTGGAC CATCGTGCTC
GGCCACGCCA CTTTCTGCGT CGTCGTCGTC TACAACAATG CGGTCGCCCG CTTCCGCCGC
ACCTCCGGTT CGCTGATCGA GGCCTCGATG GATCTCGGCG CCGACGGCTT CCAGACCTTC
CGTCATGTCA TCCTGCCGAA TATCGGCACC GCCCTTCTTG CCGGCGGCAT GCTTGCCTTC
GCGCTGTCTT TCGACGAGGT CATCGTCACC ACCTTCACCG GTGGCCAGCA ATCGACCTTG
CCGATCTGGA TGCTCGAAGA ACTCATCCGC CCGCGCCAGC GCCCTGTCAC CAATGTGGTC
GCCATGGTCG TCGTGCTCGT CACCTTCCTG CCGATCCTGG CAGCCTATTA CCTCACCCGC
GATGGCGACC AGATCGCCGG CGCCGGTAAA TAA
 
Protein sequence
MRSDLKTSPL ALKVAAAGGL LFLHLPILLI FVYAFTTEEK SYQWPPPGLT LQWFEVAWNR 
PDVWSALGLS VQVAVIATAI ALVLGTLCAA AVSQTKFFGR EAISLLVILP IALPGIITGI
ALRSAFSLFD IPFSVWTIVL GHATFCVVVV YNNAVARFRR TSGSLIEASM DLGADGFQTF
RHVILPNIGT ALLAGGMLAF ALSFDEVIVT TFTGGQQSTL PIWMLEELIR PRQRPVTNVV
AMVVVLVTFL PILAAYYLTR DGDQIAGAGK