| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3724 |
|---|
| Symbol | |
|---|
| ID | 8014562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3778174 |
|---|
| End bp | 3779160 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644826287 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002977506 |
|---|
| Protein GI | 241206410 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCG CCGTCCGTTT CCAGCAGGTA TCACGCCATT TCGGCCAGGT TCGCGCCGTC
GACGGCGTCG ATCTCGAGAT CGCGCCCGGC GAATTCTTTG CCATGCTCGG GCCGTCCGGC
TCCGGCAAGA CGACGTGCCT GCGATTGATC GCCGGCTTCG AGCAGCCGAC CGCGGGCCAT
ATCCAGATCT TCGGCGAGAC GGCCGACGGC GTTCCGCCCT ATCGCCGCAA CGTCAACACC
GTATTCCAGG ACTACGCGCT CTTCCCGCAT CTCAACATCC TCGACAATGT CGCCTACGGG
CTGATGGTCA AAGGCGTCGG CAAGGCGGAG CGGATGAAAG CGGCAGGCGA TGCCCTCGAG
CTCGTCAAGC TGCCGGGTTA CGGCGCCCGC CGCCCCGGCC AGCTGTCCGG TGGTCAGCGC
CAGCGCGTGG CGCTCGCCCG CGCACTGGTC AACAAGCCGA AGGTGCTGCT GCTCGACGAG
CCGCTCGGCG CGCTCGACCT GAAGCTCCGC GAACAGATGC AGGAGGAGCT GAAGAGCCTG
CAGCGCGCAC TCGGCATCAC CTTCGTCTTC GTCACCCACG ATCAGGGTGA GGCGCTGTCC
ATGGCCGATC GCGTCGCCGT CTTCAACGAC GGCAATATCG TCCAGGAGGG CACGCCGCAG
GATATCTACC GCCGCCCGAA GAACCGCTTC GTCGCCGATT TCGTCGGCTC GTCGAACGTC
ATCGCACCTG ATCTGATGGC CTCACTCGGC GGCGAAAGAC GCTGGGCAAG CCTCCGTCCC
GAAGCAATCC GGCTGGCAGG CGACGGTGTC GCGGCGCAGG TCGACAATGC GAGCTTCCTC
GGCGCAGCCA CGCGCCTCAC CGTTGGCCTC CGGGGGGCGC GGCTGCATGT GATGCTGCCG
GCGGGCGCAG ATGTGCCTGT CGTCGGCGCC GGCATACGCC TTGCCTGGCA GCCCGACGAT
ATCCACTACA TGGATGACGC GGCATGA
|
|---|
| Protein sequence | MTPAVRFQQV SRHFGQVRAV DGVDLEIAPG EFFAMLGPSG SGKTTCLRLI AGFEQPTAGH
IQIFGETADG VPPYRRNVNT VFQDYALFPH LNILDNVAYG LMVKGVGKAE RMKAAGDALE
LVKLPGYGAR RPGQLSGGQR QRVALARALV NKPKVLLLDE PLGALDLKLR EQMQEELKSL
QRALGITFVF VTHDQGEALS MADRVAVFND GNIVQEGTPQ DIYRRPKNRF VADFVGSSNV
IAPDLMASLG GERRWASLRP EAIRLAGDGV AAQVDNASFL GAATRLTVGL RGARLHVMLP
AGADVPVVGA GIRLAWQPDD IHYMDDAA
|
|---|
| |