Gene Rleg_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3720 
Symbol 
ID8014558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3773963 
End bp3774853 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID644826283 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002977502 
Protein GI241206406 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.44403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.422333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAA TGCTCGAAGA GATGCGCCGC TTGACGGCCC ACGCTGAAAA CCGCCCGACG 
GAAACCGGCA TACCCGGCAT ACTGATGGTC AAGGGGGAGA TCCCCGAACA CAAGCTCGGC
GCCGTTTATG AGCCAATGGT CAACCTGATC CTTGATGGCA GCAAGACGCT GACGATCGCC
GGGCAGGATT ATTATTACGA TCCAGCGAGC TACTTCGTGA TATCGATCGA TGTGCCGGCG
ACGGGCATGG TGCAGCAGGC AGGTCCCGAC CGGCCCTATA TCGGCGTCAG CCTATCGCTC
GATCCTGTAA AGGTCGCAGC GCTTCTCCTG GATCTTCCGC CGCAATCCTA TCAGGAGGGA
CAAAGCGGTG GCTATTCCGT CTGTCGCATG ACGCCGGAAC TTCCGGGTGC CTGGCTGAGG
ATGCTGCAAC TCATGGAGCG CCCGCAGGAT ATCCCTGCCC TTGCCCCGGC CTACGAACGC
GAAATCCTCT ATCGCGTGCT GCAAGGACCG CAGGGCTGGA TGCTGCGGGA TATCGCAGCA
CCCGATAGCG CCCTGTCGCG GATACGGCTC GCCATTCGCT GGGTTCGCGA GCATTATGCC
GAAGCGGTCG AGGTCGAAAA ACTCGCCGCC CTCACCGCCA TGAGCGTCTC GGCCTTTCAT
CGCCATTTCA AGGCTGTGAC GGCGATGAGC CCGATCCAGT TCCAAAAGCG TATCCGCCTG
CTGCAGGCCC GCCAGCTTCT GATTTCCCAA TCCGGAAACG CCTCCTCGGT CGCCTATTCG
GTGGGCTACG AAAGCGTCTC GCAATTCACC AGGGAATATG CACGTTTCTT CGGCCAGCCG
CCGGCGCGCG ACGCCTCGCT GATGAGGGAA AATATCAGGC CTGCCGCCTG A
 
Protein sequence
MQTMLEEMRR LTAHAENRPT ETGIPGILMV KGEIPEHKLG AVYEPMVNLI LDGSKTLTIA 
GQDYYYDPAS YFVISIDVPA TGMVQQAGPD RPYIGVSLSL DPVKVAALLL DLPPQSYQEG
QSGGYSVCRM TPELPGAWLR MLQLMERPQD IPALAPAYER EILYRVLQGP QGWMLRDIAA
PDSALSRIRL AIRWVREHYA EAVEVEKLAA LTAMSVSAFH RHFKAVTAMS PIQFQKRIRL
LQARQLLISQ SGNASSVAYS VGYESVSQFT REYARFFGQP PARDASLMRE NIRPAA