| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3700 |
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| Symbol | |
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| ID | 8014538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 3747487 |
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| End bp | 3749697 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644826263 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002977482 |
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| Protein GI | 241206386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACAG CCGGAAAGTC GCAGAGCAAG GGATCGGGAA TAGGCCGTCA CATCACCGTC
ACCGGCGTGC TTTTCTCCTT CGCAGTCATC GTCGCCGTCG TCACCATCAT GGTGCTGACG
GCGCTGGAAC GCGTGGCCGA AAATTCCAAT GTTCTCGATG ACGAGCGCTC GCGCGAAACG
ACGGTCGGTG CATTGAAGAC CTTCGAGGAT CAGCTCGGCG CGACGCTCGA CGATTACGCC
GCCTGGGATG ACGCTGCCGT CAACGTCTAC GCGGCCGACG GTATGGCCTG GACGGTGAGC
AACTACGGCG AGATGTCGGT CAACAGCTCG CTGTTCGACA TGGCGATCGT CATCGATGGC
GAGAAGAAGG CGATCATGGC CTATCGCGAC GGCAAACCGA TGGAGGAGCC GCTCACAGAT
TTCTTCGCGC CTTCGCTCTG GACCCTCTTC GACACGGTAA AGGCGGCCGG CCCGGCCGAT
CGTCCTCAGG CGATCGGTTT CGTCACCACC AAGCGGGGCA TTGCCGCCGT CGGTGTGGCA
TTGGTGCGGA AAAAGTCCGG TGCGCTGGAT GTGCCCGCCG GCCAGCAGCG CTATCTCGTT
TTCGCCCGCC ATCTCGATGA CGACAGGGTG ACCGCTCTCG GCCAGACCTA TGTCATCGGC
GGGCTGAGGC TGGCGCCGCC GAGTTTTGCG GCCGACTATC TTGTGCCGAT CGTCGATCCG
ACGGGGGCAA CGCTCGGCAA GCTGGTTTGG ATCTCGCGTT CACCCGGCGA TATCGGCTAT
GCACAGGTGC GGCCGATGGT CATCCAGGCG CTCGGCCTCG TCGGGTTGTT CTTCGTCGTG
CTGCTGGTCA TCGGCTGGCT TGCCGGCCGC CGCCTGAAGG CGGAGGAAAA CAGCGCTCGC
GAGGAGGCGC TGCGCGACAG GCTGAGCGGG CTTTCCAATC GTGATGGCCT CGGGCTGGCC
GTCGATCGTT TTGTCGTCGA GGCACGCCAG ACCAAGCGCA ACGTGCTCCT CCTCTATCTC
GACCTCGATG GCTTCAAGGA AGTCAATGAC AGCTATGGCC ATGGCACCGG CGACCAGTTG
ATCCGTGCGG TCGCGGCCGG GCTCGCTGTG CTCATTCCGC AGGGTGCCGT TCTCGCCCGC
ATCGGCGGCG ATGAATTTGC CATCGCCTTT CTCTCCGACA GTGAGAATGC CGCCGCACTA
CAGCTTGCCG AGCAGATTCT CGATTTTCTT GTCGAGCCGC TGGAGATCGG TCGCCGTGTC
GTTGTCGTCG GGGCAAGCAT CGGCATTGCC ATGTCGCCTT CCGGGACGAT CGGGCGTGAG
GAGCTGGTGC GCCGTTCCGA CCTTGCCATG TACAAGGCGA AGGAAGCCGG CCGCGCGCGC
ATGACCCTCT ACGATCCGTC GATGGACACC GATCGAGAGC AGCGCAACGC GCTGGAGCTC
GATCTCCGGA TCGCCATCGA AAGCGGCGAC CTGACGCTGG CCTACCAGCC GCTGATCGAT
GCGGCGACGC ATGCGATGAC CGGCGTCGAA GCACTGGTGC GCTGGAACCG TCCGGGCCAT
GGCCCTGTTT CGCCCGAGCT GTTCATCCCG ATCGCCGAGA CCAGCGGCCT CATCGAATCG
CTCGGTCTGT TCGTACTGCG CAAGGCCTGT GAGACGGCCA AACAATGGCC GGAACTCAAC
GTCTCGGTTA ACGTCTCGCC CGGCCAGTTC CGCAATCCTG CCTTTACCGA CTATGTGCGC
TACGTACTGA AACAGACGGA GATCGAGGCC GGCCGCATCA CGCTTGAGAT CACCGAAGGC
TACATGATTC AGAATCCGCA GCGCACCCGC CAGTCGATCG AACGGCTGAA GGGGCTGGGG
GTCAAGGTGG CGCTCGACGA TTTCGGTTCC GGCTTCTCGT CGATCGGTTA TCTCAGGCAG
TTCGGCTTCG ACCGCATCAA GATCGACCGC TCGCTGGTCA TGGGCGTCAA CGACAAACGC
CAGCGCGAGA TGCTGCAGGC GACGGTGGCG CTCGCCCGCT CGCTCGACAT TCCGGTGACG
GCCGAAGGCA TCGAGACCGA GGAGCAGGCG ATAGCCATGC GCCTCTTCGG CTGCGACTGC
CTGCAGGGCT ATTTGTTCGG CAAGCCCGTG ATATCAGAGC TTATCACCGA GATGCTGCAC
GAGCGACGTG AAGCGGAGCC GGCAGCCCGG CGTCGCATCG ACGCAGCCTG A
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| Protein sequence | MQTAGKSQSK GSGIGRHITV TGVLFSFAVI VAVVTIMVLT ALERVAENSN VLDDERSRET
TVGALKTFED QLGATLDDYA AWDDAAVNVY AADGMAWTVS NYGEMSVNSS LFDMAIVIDG
EKKAIMAYRD GKPMEEPLTD FFAPSLWTLF DTVKAAGPAD RPQAIGFVTT KRGIAAVGVA
LVRKKSGALD VPAGQQRYLV FARHLDDDRV TALGQTYVIG GLRLAPPSFA ADYLVPIVDP
TGATLGKLVW ISRSPGDIGY AQVRPMVIQA LGLVGLFFVV LLVIGWLAGR RLKAEENSAR
EEALRDRLSG LSNRDGLGLA VDRFVVEARQ TKRNVLLLYL DLDGFKEVND SYGHGTGDQL
IRAVAAGLAV LIPQGAVLAR IGGDEFAIAF LSDSENAAAL QLAEQILDFL VEPLEIGRRV
VVVGASIGIA MSPSGTIGRE ELVRRSDLAM YKAKEAGRAR MTLYDPSMDT DREQRNALEL
DLRIAIESGD LTLAYQPLID AATHAMTGVE ALVRWNRPGH GPVSPELFIP IAETSGLIES
LGLFVLRKAC ETAKQWPELN VSVNVSPGQF RNPAFTDYVR YVLKQTEIEA GRITLEITEG
YMIQNPQRTR QSIERLKGLG VKVALDDFGS GFSSIGYLRQ FGFDRIKIDR SLVMGVNDKR
QREMLQATVA LARSLDIPVT AEGIETEEQA IAMRLFGCDC LQGYLFGKPV ISELITEMLH
ERREAEPAAR RRIDAA
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