| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3689 |
|---|
| Symbol | |
|---|
| ID | 8014530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3738011 |
|---|
| End bp | 3739144 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644826252 |
|---|
| Product | Orn/DAP/Arg decarboxylase 2 |
|---|
| Protein accession | YP_002977471 |
|---|
| Protein GI | 241206375 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.192406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.735507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC AGCGCATCCG CGACTTTCTC GCAACCCGAC GTCCCGATGG TCCCTGCCTC
GTGGTTGACC TCGACGTCGT TCGCGACAAT TTCCACGCCT TCCGTCACGC CATGCCGGAC
AGCGCCATCT ACTACGCCGT CAAGGCCAAC CCGGCCCCGG AAGTGCTGAA GCTGCTTGCA
GGCCTCGGCT CCAATTTCGA TTGCGCGTCC GTTGCCGAAA TCGAAATGGC GCTCGAAGCC
GGTGCAACCG CCGCCCGCAT CTCCTACGGC AACACGATCA AGAAGGAACG TGACGTTGCC
CGCGCGCATG CGCTCGGCGT CAGCCTCTTT GCGGTCGACA GCCACGAGGA AGTCGAGAAG
ATCTCGCGCG CCGCTCCCGG CGCCCGTGTC TTCTGCCGCG TGCTGACCGA TGGTGAAGGC
GCTGAATGGC CGCTGTCGCG CAAGTTCGGC TGCGTTCCCC AGATGGCTGT CGACGTTCTC
GTCTACGCCC ATCAGCTTGG CCTGCAGTCC TATGGCGTCT CGTTCCATGT CGGTTCGCAG
ATGACCAAGG TCGATGCCTG GGATTCGGCA CTCGCCGATG CCAAGCGCGT CTTCGTATCG
CTTGCCAAGC AGGGCATCCA CCTGCAGATG GTCAACATGG GCGGCGGCTT CCCGACCAAG
TACCTGCGTG ACGTTCCGTC CGCAGAAGCT TACGGCAAGT CGATCTACCA GGCGCTGCGC
ACGCATTTCG GCAACCAGAT CCCGCAGACG ATCATCGAGC CGGGCCGCGG CATGGTCGGC
AATGCCGGTG TCATCAAGGC GGAAGTCGTT CTGATTTCGA AGAAGTCGGA CAATGACGAT
GCCCGCTGGG TCTTCCTCGA CATCGGCAAG TTCGGCGGTC TCGCCGAGAC GATGGACGAA
GCCATCCGCT ATCCGATCCG CACGGAACAC GATGGTGACG AGATGGAGCC CTGCGTCATT
GCCGGTCCGA CCTGCGATTC GGCCGACGTG CTCTACGAGA AGAACCTCTA TCCGCTGCCG
ATCTCCCTTT CGATCGGCGA CGAGGTCCTG ATCGAAGGCA CCGGCGCCTA TACGACGACC
TATTCGGCGG TCGCTTTCAA CGGTTTCGAC CCGTTGAAGG CCTACGTCAT CTAA
|
|---|
| Protein sequence | MTTQRIRDFL ATRRPDGPCL VVDLDVVRDN FHAFRHAMPD SAIYYAVKAN PAPEVLKLLA
GLGSNFDCAS VAEIEMALEA GATAARISYG NTIKKERDVA RAHALGVSLF AVDSHEEVEK
ISRAAPGARV FCRVLTDGEG AEWPLSRKFG CVPQMAVDVL VYAHQLGLQS YGVSFHVGSQ
MTKVDAWDSA LADAKRVFVS LAKQGIHLQM VNMGGGFPTK YLRDVPSAEA YGKSIYQALR
THFGNQIPQT IIEPGRGMVG NAGVIKAEVV LISKKSDNDD ARWVFLDIGK FGGLAETMDE
AIRYPIRTEH DGDEMEPCVI AGPTCDSADV LYEKNLYPLP ISLSIGDEVL IEGTGAYTTT
YSAVAFNGFD PLKAYVI
|
|---|
| |