| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3673 |
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| Symbol | |
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| ID | 8014518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 3720115 |
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| End bp | 3722418 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644826236 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002977455 |
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| Protein GI | 241206359 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.467962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAG ATAACCCGAA CAGGGTCCCT ATAGATGTGT ATCTGTCGTT TGTGAGTTCC
CTTTCCGGGA ACCGCATGAC GCTGCTTGCT GGCGTGATCG TGCATGTCGC GACATGCCTT
GCCGTTGCTG CCAAGACCCA GTCCTTCGTC TATATCCTGC TGGCGGCCGC CTTCCTCCTG
GTCTTCTGCG TTCGCATGGT CATCTTCCGG CAGTTCGACC GCGTTGACAA GGAGAGCCTG
TCGCACGCCG GAATCGAGCG TTGGGAGCGG ATCCTGGTTG CCGGTGCTGC CTGCACCACC
ACCCTGCTTG GCATCGCCAG CGGCTACGCC ATCTTCGTCG TCCATGATTC CTTTGCGGAA
CTTGCCTGCA TTGCGGTTAC CATGGCGACC ATGGTTTCCG TTGTCGGCCG CAATTATGGT
TCGCGCCTGG CGGTTGACCT CCAGACCTTT TCCTGCTGTC TGCCGATGAT TGTCTGCAGC
CTGTTGGCGC TCGATTTTTA TCGTGGCTTG TTGTCGATCT TCCTCATTCC CTTCTGGCTG
ACGACGCGTG CCATGGCGAA CGGCGTGCGC GAGTTCCTCT ATGAGAATGT CATCGCGCGC
CGGGAAATCA CCATCATCGC CGACCGCTTC GATACGGCGC TCAACAACAT GCCGCATGGC
CTAGTCATGG TCGATGCCGA AAACCGCATC CAGGTCGTCA ATCGCAAGGC CTGCGAGCTT
TTGAAGATCG GTGCGCCGGA TCGGTTGAAG GACCGCGATC TCGGCGCCGT GCTACGCTAC
GGCGCGCGCT ACAGCTTCAT GGACGCCTCG CAGCCGGAGC TCATCCTGCG CCAGCTCACC
CAAGTCGCCG AAGGCAACCT GTCGCGCACG CTCATCCATT TCCCCGAGGG CCTGTCGCTC
GAATTCTCCG CCAGCCGCAG GGCCGACGGC GGCGCCGTGC TGATCTTCGA GGACGTGTCG
AGCCGGGTGA AGGCGGAGCA GAAGATCATG CACATGGTCC GCTTCGATGC GCTGACCGGC
CTGCCGAACC GAGAATATTT CGGGCAGCTG GTGCAGGATT ATCTCGCCAA ACATCAAAGG
AAGTCCGGGC CACTCGGCTT CATGGTTCTC GATATCGACG AGTTCAAACA TGTCAACGAC
ATGCGCGGCC ACGTTACAGG CGACCACCTG CTTTGCGCCA TCGCCGCCCG CATCAAGCAG
GCGTCCGGCA ACGCCATCCT CGGCCGGTTG ATGGGAGACC AGTTCATCCT GTTCTTCCCG
CATGCGAAGG AACAGGCCTC GCTCGACGTC GAGATCCGCC GCGTGCACGC CGCAATCCAG
GGCAACTACG CAGTCGACGA GCTGACCTTC CTGGTTTCGC TCAGCGCCGG CTACGCGATC
CTCGAGAGTG CTGCGTTTGC GATGGACGAA TGGAGCGTCA AGGCGGATCT GGCGCTGTTC
GAAAGCAAGT CGCGCTTCAA GGGCGGCATT TCCGGCTTCG AGCGGGAGAT GGATGGCCGC
TATATCGAGC AGCAGAAGCT GAAAGCGGAT TTGCGCGACG CGGTCTCGGC GCAGGCGCTG
CATCTTGCCT TCCAGCCGAT GTTCCGGTCC GACGGCTCGC GGATCGAATG CGCCGAAGCG
TTGGCGCGCT GGGTGCATCC GGAGAAGGGC TCGATCCCGC CCGACGTCTT CATCCGGCTC
GCCGAAGATA TGGGCATCAT CTCCGACATC ACCCGTTTCG TGTTGTTCAA GGCGTGCAGC
GAATGCATGA ACTGGCCGGA ACATATCGCC GTCTCGGTGA ACCTTTCGGC GCGGGATCTG
CGCGATGCCG ATATTCTCGC GGTGGTCGCC GAAGCGCTTG CCCATTCCGG TCTCGACGCG
GCGCGGCTGC ATCTCGAAGT CACCGAAAGC TGCCTGATCG ACGAGCCGGC GGCTGTGCGC
GCCATCCTGG CCGAGCTCAG GGCTCGCGGC ATCACCATCG CCATCGACGA TTTCGGTACC
GGCTTCTCCA GCCTCAGCTA CCTCGACACA CTGCCGCTCG ATATCGTCAA GATCGATCGC
TCCTTCGTGC GCAACATCGT CGAAGATAAC CGCCGCTTGA AGCTGCTGCG CGGCACGGTC
CATCTCGCCC GTGAACTGGG CCTGAAGATC GTCATTGAAG GTGTCGAAAC CGAGGAGCAG
CTCGCACTGC TCAACAAGCA CCGCAGCGCC GATCTTGTTC AGGGTTACGT TTTCTCGCCG
CCGGTGCCTT CCCAGAATAT CCCGCTGTTG CAGCAGGGCA TCGGCCGCCG CGTCGTACAA
CGCCGCCGCA ACAAGGTCGC CTGA
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| Protein sequence | MKPDNPNRVP IDVYLSFVSS LSGNRMTLLA GVIVHVATCL AVAAKTQSFV YILLAAAFLL
VFCVRMVIFR QFDRVDKESL SHAGIERWER ILVAGAACTT TLLGIASGYA IFVVHDSFAE
LACIAVTMAT MVSVVGRNYG SRLAVDLQTF SCCLPMIVCS LLALDFYRGL LSIFLIPFWL
TTRAMANGVR EFLYENVIAR REITIIADRF DTALNNMPHG LVMVDAENRI QVVNRKACEL
LKIGAPDRLK DRDLGAVLRY GARYSFMDAS QPELILRQLT QVAEGNLSRT LIHFPEGLSL
EFSASRRADG GAVLIFEDVS SRVKAEQKIM HMVRFDALTG LPNREYFGQL VQDYLAKHQR
KSGPLGFMVL DIDEFKHVND MRGHVTGDHL LCAIAARIKQ ASGNAILGRL MGDQFILFFP
HAKEQASLDV EIRRVHAAIQ GNYAVDELTF LVSLSAGYAI LESAAFAMDE WSVKADLALF
ESKSRFKGGI SGFEREMDGR YIEQQKLKAD LRDAVSAQAL HLAFQPMFRS DGSRIECAEA
LARWVHPEKG SIPPDVFIRL AEDMGIISDI TRFVLFKACS ECMNWPEHIA VSVNLSARDL
RDADILAVVA EALAHSGLDA ARLHLEVTES CLIDEPAAVR AILAELRARG ITIAIDDFGT
GFSSLSYLDT LPLDIVKIDR SFVRNIVEDN RRLKLLRGTV HLARELGLKI VIEGVETEEQ
LALLNKHRSA DLVQGYVFSP PVPSQNIPLL QQGIGRRVVQ RRRNKVA
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