| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3612 |
|---|
| Symbol | |
|---|
| ID | 8014463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3646873 |
|---|
| End bp | 3648096 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644826176 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_002977396 |
|---|
| Protein GI | 241206300 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA ATCACAAAAA CTCCCTTCGT GGTCTTGCTC TCGCCCTCAT TGTCGCTGCC
CAGGTGGCAC TGGTCCCCGA CAACGCGAAA GCTGATTCCC GCTTCCAGAA ATGGATCGCG
GATTTTTACC AGACTGCCGC TCAGAGTGGC ATCAGTAAGG CAACCTATCA AAAGGCCTTT
TCCGGGGTGA GCGAGCCCGA TCCGACCGTG CTCGAAAAGG CGGCCTACCA GCCGGAATTC
ACCTCGAAGA TCTGGGACTA TGTCGATTCC CGCGTCAACC CCTATACGGT CAAAATCGGC
CGCGAGATGG CCGCCAAACA CGCAAGGACG CTCGCTGCGA TCGAGCAGCG TTTCGGCGTC
GACAAGACCA TTTTGCTGGC CATCTGGTCG ATGGAATCGA ATTACGGCGC GGTTCTCGAC
AAGGACGACC GGCTGCACTA CGTGCCGCGC GCCCTGGCCA CGCTTGCCTA TGCCGATCCG
AGCCGCGCCA AATTCGCCAA GAAGCAGTTG GTCGCCGCGC TGAAGATCCT GCAGAACGGC
GATGTGCCGG CACGCAAGAT GACCGGCTCC TGGGCCGGCG CCATGGGCCA CACCCAGTTC
ATCCCGACAA GCTACCTGCT TTATGCTGTC GATGCCGACG GCAACGGCCA TCGCGATATC
TGGAACTCGA TCCCCGACGC ACTGGCGACC TCGGCCAATC TCCTGATGAA GAACGGCTGG
GATACCGGCA AGACCTGGGG CTATGAGGTC GTCGTTCCCG CAGCGGCCGC CAAGCAGGCC
GGCAAGACCC ATACACTGGC CCAATGGGCG GCACTCGGCC TGACCCGCCC GAACGGCAAG
GCCTTCCGCG AGAGCGCCAC CAAGGCCATG CTGAAGATGC CGGCCGGAGC TGGCGGCCCA
GGCTTCCTGA TGACCGCCAA CTTCTTCACC ATCAAGAACT ACAATGCCTC GGACAGCTAC
GCGCTTGCCG TCGGCCTGCT TGCCGACCAG ATCGCCGGCT ACGGCGGGAT GCAGCAGCGT
TGGCCGCGCC CGAACGGCGC ACTCGACATC ACCGAGAAAT TCGAGCTGCA GACGCGTCTC
AAGACGCTCG GCTATTACAA TGGCGAGGTG GACGGCAATT TCGGCTCGGG TTCGAAGGCG
GCGATATCAG CCGTGCAGTC TCGCATCGGC ATGCAGCCGG ACGGCGAGCC CTCGCTGCCG
CTTCTGAACG CACTTCGTCG CTAG
|
|---|
| Protein sequence | MTQNHKNSLR GLALALIVAA QVALVPDNAK ADSRFQKWIA DFYQTAAQSG ISKATYQKAF
SGVSEPDPTV LEKAAYQPEF TSKIWDYVDS RVNPYTVKIG REMAAKHART LAAIEQRFGV
DKTILLAIWS MESNYGAVLD KDDRLHYVPR ALATLAYADP SRAKFAKKQL VAALKILQNG
DVPARKMTGS WAGAMGHTQF IPTSYLLYAV DADGNGHRDI WNSIPDALAT SANLLMKNGW
DTGKTWGYEV VVPAAAAKQA GKTHTLAQWA ALGLTRPNGK AFRESATKAM LKMPAGAGGP
GFLMTANFFT IKNYNASDSY ALAVGLLADQ IAGYGGMQQR WPRPNGALDI TEKFELQTRL
KTLGYYNGEV DGNFGSGSKA AISAVQSRIG MQPDGEPSLP LLNALRR
|
|---|
| |