Gene Rleg_3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3596 
Symbol 
ID8014449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3629022 
End bp3630569 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content62% 
IMG OID644826161 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002977381 
Protein GI241206285 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.363783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTT ACAATGAGCT CAAGGGAGCA GGGCAAATCC TCGTGGTCGA GGACGACCCC 
GTGCAGCGCC GCCTGCTCAA GAACGCAATC GAGCGTCACG GCCATGTCGT GCACCAGGCG
GAAAATGGCC GTATCGGCCT GGAAATGGTC AAACGCGACA GCGGCCTTTT CAACGTCATC
GTGCTCGACC TGATGATGCC GGAGATGACC GGCCTCGAAT TCCTCGATGC GCTTCACGAA
TTCGGCACGC AGATCCCTGT CATCGTGCAG ACGGGGCAGG GCGGCATCGA AACGGTGGTG
CAGGCCATGC GCGCCGGCGC CTTCGATTTC GTCGTCAAGC CGGTCTCGCC CGAACGCATC
GCCACTTCGA TCTCGAACGC GATGAAGCTC GACCAGCGCG AAGTCAAGGC GCGCGCCGGA
CGCCGGTCGC GCTCAGGTTC GGTTGGCTTC GACGATATCG TCTCGGCAAG CCCGGCGATG
CTCCGCGTCA TCGATCTCGC CCAGCGGGCG GCTCAGTCCA ACATTCCCGT CGTGCTCGAA
GGCGAATCCG GCGTCGGCAA GGAGCTGGTG GCGCGCGCCA TCCAATCGGG CGGCGACCGC
TCGAACAAGC CCTTCGTCAC CGTCAATTGC GGGGCGATCC CGCATAATCT GGTCGAGAGC
ATTCTCTTCG GTCACGAGAA GGGCGCGTTT ACCGGCGCGA CCGAGCGCCA CATCGGCAAA
TTCATGGAAG CCGACGGCGG CACCATCTTC CTTGACGAGA TCGGCGACCT GCCGCTCGAA
GTGCAGGTGA AACTCTTGCG CGCCGTCCAG CAGGGCGAGA TTGAGACCGT CGGTGCGCGC
ACCGCGCACA AGGTCAATGT CCGGCTGATC TCGGCGACCA ACAAGGATCT GATCGAGGAG
GTCAAGAACG GCCATTTCCG CGAGGATCTC TACTATCGCC TCAACGTCTT CCCGATCACC
ATTCCGGCGT TGCGCAAACG CAAGGAAGAT ATTCCGCATC TGGTGCGCGT CTTTGCCGAC
CGCTTCTCCA GCGAGCAGAA GAACGGCCGC CGCATGACGG TGAATGCCGG CACGCTGGCT
TTGCTGACCG CCTATGACTG GCCGGGCAAT ATCCGCCAGC TCGAAAACGC GATCTTCCGC
GCAGTCGTCC TGGCCGAAGG GCCGGAGCTG ACCGAGGCTG ATTTCCCGCA GATCGCCGCC
CAGCTTCCGG AATATGACGT GGTGGATCAC CTGGCCCTCG TTGCCGACAA TACCGGCCTC
GATCCCGACA ACGGCTATGG CGAGGACTTC AGGGCGTCGA TGTCGGGGGA GGTACACCAC
CACCGCCTGT CCGAGGCCTC GGAAAACGCG ATTGCCAGCG TCAATCCTGC CGGAGACGTG
CGCAAACTTG CCGATGTCGA GGAGGAACTC ATCCGATTCG CACTCAAATT CTATCGCGGG
CAGATGAGTC AAGTAGCGCG CAAGCTCGGT ATCGGCCGAT CCACACTTTA TCGCAAGCTC
AAGGACTACG GCATAGACCC TGACAATCCC CAGAAAGATG CGGCTTAA
 
Protein sequence
MTGYNELKGA GQILVVEDDP VQRRLLKNAI ERHGHVVHQA ENGRIGLEMV KRDSGLFNVI 
VLDLMMPEMT GLEFLDALHE FGTQIPVIVQ TGQGGIETVV QAMRAGAFDF VVKPVSPERI
ATSISNAMKL DQREVKARAG RRSRSGSVGF DDIVSASPAM LRVIDLAQRA AQSNIPVVLE
GESGVGKELV ARAIQSGGDR SNKPFVTVNC GAIPHNLVES ILFGHEKGAF TGATERHIGK
FMEADGGTIF LDEIGDLPLE VQVKLLRAVQ QGEIETVGAR TAHKVNVRLI SATNKDLIEE
VKNGHFREDL YYRLNVFPIT IPALRKRKED IPHLVRVFAD RFSSEQKNGR RMTVNAGTLA
LLTAYDWPGN IRQLENAIFR AVVLAEGPEL TEADFPQIAA QLPEYDVVDH LALVADNTGL
DPDNGYGEDF RASMSGEVHH HRLSEASENA IASVNPAGDV RKLADVEEEL IRFALKFYRG
QMSQVARKLG IGRSTLYRKL KDYGIDPDNP QKDAA