Gene Rleg_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3563 
Symbol 
ID8014423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3599785 
End bp3601824 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content65% 
IMG OID644826128 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002977348 
Protein GI241206252 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0974951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC TCGATCCGGT CGCCGTCTTC CGCACGGAAG CTGCCGAATG CCTCGAAGCG 
ATCGAGGCTG GTCTTCTCGA CCTGACCCAC CAGCTCGACA ACAAGGATCT CGTCGATGCC
GTGTTCCGCG GCCTCCACAC GCTCAAGGGC TCCGGTGCGA TGTTCGGTTT CGAGGCGCTC
GCCGCCTTCA CCCATCATTG CGAAACAGCC TTCGATCGCG TCCGCAAGGG CGAGGTCGCG
GCGACCAGCG AACTCGTCGC CGCCGTTCTC GCCGCCCAGG ACCATATGCG AGCCCTGGTC
GATCAGCCGG ACGCCGATCA CGGCGATACC GGGCATAAGC TTCTGGCACA GTTGCAAGCT
GCCGTCGGCG GCAAGGAAGC AGTGCCGGCC GCTGTTGCCG CACCCGCGGC CGTGCGCGAG
ACCCCGGCGA AGAAGAAGAG CAGCTGGCGC ATCCGCTTCA GCCTGCCTGC CAATTCGATG
GCCAACGGCA CCAACCCGCT CGGCCTGCTG GACGAGCTGC GCGATCTCGG CGAATGCACC
GTGCGCGCCA ACTCCTCGGC CATTCCGCCC CTCGACGCGC TGGCTCCGAC GGAACTCCAC
ATTTCCTGGG ACGTGACGCT GACCAGCGAG CAAGACCGCT CAGCGATCGA CGACGTCTTC
ATCTTCGTGC TTGATGATAT GGAACTCAGC GTCGAGGAGA TCGGCGGTAC GGCAGCGGCA
ACCGCCGCTC CGGTTGAGGA AAAGGCCGCA ACTGCCCCTG TCGCCGCGGT ATCGGCGGCT
TCGCCGACCA GCGTCCCGGA ATTCCGTCCT GTCGAGGCGG TTCCGGCCAA GCGCGAGGCG
CCCGCCGCCA TCAGCCAGGC GAAGGCGGCC GAGAATGTCC GCGTTCCGGC CGAACGTCTC
GATGAGCTGA TGGACCGTGT CGGCGAGCTC GTCATCGCGC AATCGCGCCT CAGCCAGCTG
GCCAGTGCCA GCGCCGATAT CGCGCTGCGC TCCGTCTCGG AAGAAATCGA ACGCCTCTCC
GGCGAATTGC GCGACACGAT GATGGTGCTG CGCATGGTGC CGGTCGCCAC CCTGTTCTCC
CGTTTTCGCC GCCTCATTCA CGATCTCGCC CGCGAAACCG GCAAGGTGAT CGAACTGGTG
ACGGAGGGCG AGAGCACCGA AGTCGACAAA ACCGTCATCG AGCGTCTGGC CGATCCGCTT
GTGCATCTGG TGCGCAACTC GATCGATCAC GGCCTCGAAA CGCCCGCCGA CCGCCTTGCC
TCCGGCAAGA CCGAAGCCGG CACGGTGACG CTTTCGGCCC GCCAGGCCGG CGGCGAGGTG
ATCATCTCGA TCAAGGATGA CGGCCGCGGC ATCAATCGTG AACGCGTTCG CGCCAAAGCG
GAATCCTCCG GTCTCATCCA GCCCGGTCAG CCGCTTTCCG ACTCCGAGCT GCTGCAACTA
ATCTTCGCCC CCGGCTTCTC GACGGCCGCG GCAATCACCA ATCTCTCCGG CCGCGGGGTC
GGCATGGACG TGGTGAAGAA GACGGTCGAA GCGCTCCGCG GCGCGATCGA TATCGTCAGC
CTGCCGGGAC AAGGTTCGGA AGTGTCGCTG CGCATTCCGC TGACGCTCGC CATCATCGAC
GGCCTGCTGG TGCGGGTCGG CTCCGGCCGC TACGTCATCC CGCTCTCGGC AGTCGAGGAA
TGCCTCGAAC TGTCGCTCGA GGAAGATCTC CGCTCGCGCG GCCGCAGCTT CATCTCGCTG
CGCGACAGCC TGGTGCCGTT CCTGCGCCTG CGCGACCTCT TCCGCACCGG CACTAAGCCC
GACGTGCATC AGAAGGTCGT CGTCATCTCG ACCGGCACGG AGCGCGTCGG CCTCGTCGTC
GACCAGATCA TCGGCGACCA CCAGACGGTC ATCAAGTCGA TGTCGAAACT GCACAATAAC
GTCGCGACCT TTTCGGGCGC CACCATTCTC GGCGACGGCA GCGTCGCTCT CATTCTCGAC
GTTGGGCACC TGGTTGCCGC GGGTCAGCAA CAGGAGGCGC AATTGCGTGT AGCAGGATGA
 
Protein sequence
MSTLDPVAVF RTEAAECLEA IEAGLLDLTH QLDNKDLVDA VFRGLHTLKG SGAMFGFEAL 
AAFTHHCETA FDRVRKGEVA ATSELVAAVL AAQDHMRALV DQPDADHGDT GHKLLAQLQA
AVGGKEAVPA AVAAPAAVRE TPAKKKSSWR IRFSLPANSM ANGTNPLGLL DELRDLGECT
VRANSSAIPP LDALAPTELH ISWDVTLTSE QDRSAIDDVF IFVLDDMELS VEEIGGTAAA
TAAPVEEKAA TAPVAAVSAA SPTSVPEFRP VEAVPAKREA PAAISQAKAA ENVRVPAERL
DELMDRVGEL VIAQSRLSQL ASASADIALR SVSEEIERLS GELRDTMMVL RMVPVATLFS
RFRRLIHDLA RETGKVIELV TEGESTEVDK TVIERLADPL VHLVRNSIDH GLETPADRLA
SGKTEAGTVT LSARQAGGEV IISIKDDGRG INRERVRAKA ESSGLIQPGQ PLSDSELLQL
IFAPGFSTAA AITNLSGRGV GMDVVKKTVE ALRGAIDIVS LPGQGSEVSL RIPLTLAIID
GLLVRVGSGR YVIPLSAVEE CLELSLEEDL RSRGRSFISL RDSLVPFLRL RDLFRTGTKP
DVHQKVVVIS TGTERVGLVV DQIIGDHQTV IKSMSKLHNN VATFSGATIL GDGSVALILD
VGHLVAAGQQ QEAQLRVAG