Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3486 |
Symbol | |
ID | 8014358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3519860 |
End bp | 3521455 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644826051 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_002977271 |
Protein GI | 241206175 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.158391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCTC GCGTTCTCGT ATCCGACGAA TTGTCGGAAA CCGCCGTCCA GATTTTTCGC GACCGCGGCG TCGAAGTCGA TTTCGAACCG CAGCTCGGCA AGGACAAAGA CCGTCTGCTC GAAGTCATCG GCAAGTATGA TGGCCTGGCC ATCCGCTCCG CCACCAAGGT GACGGAAAAG ATCATCGAGG GGGCGACGAA CCTCAAGGTC GTCGGCCGTG CCGGCATAGG CGTCGACAAT GTCGATATCC CGGCCGCCTC GCGCCGCGGC ATCATCGTCA TGAACACGCC CTTCGGCAAC TCGATCACTA CGGCCGAACA CGCGATCGCG CTGATGTTCG CCGTCGCCCG CCAGCTACCG GCAGCCGATA CCTCGACGCA GGCCGGCAAG TGGGAGAAGT CGAAGTTCAT GGGTGTCGAG ATCACGGGCA AGACGCTCGG CGTCATCGGC GCCGGCAATA TCGGCTCGAT CGTCTGCGCC CGCGCCATCG GCCTGAAGAT GCACGTCGTC GCCTACGATC CGTTCCTCTC CAAGGAGCGC GCCGAGGAGA TGGGCGTCAC CAAGGTCGAG CTGGAAGAGC TTTTCGCCCG CGCCGACTTC ATCACGCTGC ATGTGCCGAT GACCGACAAG ACGCGGGGCA TCCTCAACAA GGAAGCGCTG GCAAAGACCA AGCCCGGCGT GCGCATCATC AACTGCGCCC GCGGCGGCCT GGTCGATGAG GCAGCGCTTG CCGAAGCGAT CAAGTCCGGC CATGTCGCGG GTGCCGCCTT CGACGTGTTC GAGGTCGAGC CCGCCAAGGA AAGCCCGCTC TTCGGCCTGC CGAACGTCGT CTGCACGCCG CATCTCGGCG CCTCGACGAC CGAGGCGCAG GAGAACGTCG CTTTGCAGGT GGCCGAACAG ATGGCGGATT ACCTCGTCAA TGGTGCGGTT TCCAACGCCA TCAACATGCC GTCGATCACG GCTGAGGAAG CGCCGATCCT GAAGCCCTTC ATCCGTCTTG CCGACGTTCT CGGCGCCTTC GTCGGCCAAG TCACCGAAGA GCCGATCAAG GAAATCGAAA TCCTCTATGA CGGCATCACC GCCAACATGA ACACCCGGGC GCTGACGAGC GCCGCGCTCG CCGGCCTCAT CCGCCCGCAG GTCGCCGACG TCAACATGGT TTCGGCGCCG ATCATGATCA AGGAAAAGGG CATCGTGCTT TCCGAGGTCA AGCGCGACAA GACAGGCGTC TTCGACGGCT ATATCAAGCT GACGGTGACC ACCGAAAGCA TGACACGCTC GGTCGCCGGC ACGGTGTTTT CGGACGGCAA GCCGCGCTTC ATCCAGATCA AGGGTATCAA CCTTGATGCC GATGTCGGCT CGCACATGAT CTACATCACC AATACCGATG TTCCCGGCAT GATCGGCTTC ATCGGCACGA CGCTTGGTGC TGCCGGCGTC AACATCGCCA ACTTCCAGCT CGGCCGTGAC AAGCAGGGCG GCGACGCCAT CGCGCTGCTC TATGTCGATG GTAAGGTTGA TGACGCCGTG CTTGCTGAGT TGACCGCCCA CCAGGCGGTT CGCCAGGCAA AGCCGCTGAC CTTCAATATC GACTGA
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Protein sequence | MAPRVLVSDE LSETAVQIFR DRGVEVDFEP QLGKDKDRLL EVIGKYDGLA IRSATKVTEK IIEGATNLKV VGRAGIGVDN VDIPAASRRG IIVMNTPFGN SITTAEHAIA LMFAVARQLP AADTSTQAGK WEKSKFMGVE ITGKTLGVIG AGNIGSIVCA RAIGLKMHVV AYDPFLSKER AEEMGVTKVE LEELFARADF ITLHVPMTDK TRGILNKEAL AKTKPGVRII NCARGGLVDE AALAEAIKSG HVAGAAFDVF EVEPAKESPL FGLPNVVCTP HLGASTTEAQ ENVALQVAEQ MADYLVNGAV SNAINMPSIT AEEAPILKPF IRLADVLGAF VGQVTEEPIK EIEILYDGIT ANMNTRALTS AALAGLIRPQ VADVNMVSAP IMIKEKGIVL SEVKRDKTGV FDGYIKLTVT TESMTRSVAG TVFSDGKPRF IQIKGINLDA DVGSHMIYIT NTDVPGMIGF IGTTLGAAGV NIANFQLGRD KQGGDAIALL YVDGKVDDAV LAELTAHQAV RQAKPLTFNI D
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