Gene Rleg_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3479 
Symbol 
ID8014350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3512921 
End bp3513637 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID644826043 
ProductABC transporter related 
Protein accessionYP_002977264 
Protein GI241206168 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.279932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCC TGTCGCTTGA GGTCGAGAAT CTGTCGGCCG GATATGGGCC GACGAGAGTG 
CTCGAAGGCA TTTCCTTCTC CGTGCCGGCA GGCGCCCGGC TTGCCGTGCT CGGCCGCAAT
GGCATGGGCA AGACCACGCT GCTCGCGACG CTTGCCGGGC AGACCAGGCG ATACGAGGGC
AGCATCCGCC TCGGCGATTC GGATGTCACG ACGGCACCGA GCGCTGCACG CGCGCATAAA
GGCCTCGGAT ATGTGCCGCA GGCACGCTGC GTCTTCCCGA CGCTGACGGT CGAAGAAAAT
CTCTTCGTCG GCTTGAAGGC GCGACCGAAG ACGGCGCTGG AGGAAGCCTA TTCGATGTTC
CCGCGCCTGA AGGAGCGCCG CCGCAACCTC AGCAGCCAGC TTTCCGGCGG CGAGCAGCAG
ATGCTCTCCA CGGCTCGCAC CATTCTCGGT CGCCCCTCCG TCCTGCTGCT CGACGAACCG
CTGGAGGGCC TGGCACCCGT TATCTGCGAG GAACTGATGG CGGCCTTCAC CGACCTCGCC
AAGACGGGAG ACATGACCAT CCTGCTGGTC GAGCAGCGCA TCCAGAGCGC GCTCGATTTC
GCCGATCAAG TCGTCATTCT CGAACGCGGC AGACTGGCCT GGACCGGAAC GCCGGAAAAT
CTCACCAGGG ATCACGAGGC TGTCGAAAGC CTGCTCGGGG TCGGCGGCCT GCATTGA
 
Protein sequence
MPALSLEVEN LSAGYGPTRV LEGISFSVPA GARLAVLGRN GMGKTTLLAT LAGQTRRYEG 
SIRLGDSDVT TAPSAARAHK GLGYVPQARC VFPTLTVEEN LFVGLKARPK TALEEAYSMF
PRLKERRRNL SSQLSGGEQQ MLSTARTILG RPSVLLLDEP LEGLAPVICE ELMAAFTDLA
KTGDMTILLV EQRIQSALDF ADQVVILERG RLAWTGTPEN LTRDHEAVES LLGVGGLH