Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3461 |
Symbol | |
ID | 8014332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3493482 |
End bp | 3495284 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644826025 |
Product | histidine kinase |
Protein accession | YP_002977246 |
Protein GI | 241206150 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.350821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCTGGTGG TGCCGCTGAT CATCTTCTCC TTCTTCACCT ATGGGAGCGC GATTGCGACG CGCGCCTATA TGGAGGAAGC CTCGGCGCAG GCAGGAACGG CGTTGCGCCT TGCCGTTTCG GCACTCAGCG GCCATCTCAA CCGCTACGAG GCGCTGCCGG CGCTGATCGC CGATCACGAC GACATCAAGG AACTGGTGAG CGCGCCTGAG GATGTGGCGC TGCGCGATGC GGCCAATCTC TATCTCAAGG AGATCAACGG ACTGCTGAAA TCCTCCGATA TCTATGTGGT CAAGCCAGAC GGAGAGACGA TCGCGGCCAG CAATTACGAT GGGCCTGCAA GCTTCGTCGG ACAAAATTTC AGCTACAGGC CCTATTTCCA GGATGCAATC GAAGGCCGGC AGGCACGGTT TTACGCGCTC GGCACCACCT CGCTGAAGCG CGGCTACTAT TTTGCCGCAC CGATCCGGAC CGGCGCGGAT ATTCGTGGCG TCATCGTCTT CAAGGTCGAT ATCGATATGA TCGAGTCCTC CTGGGGCGGC GGCGAATACA GGATTTTCGT CTCCGATCCG GAGGGCATCA TCTTCATGTC CGGCAGCCCG GAATGGCTCT ATGGCGCGAT CCTGCCGCTG ACGGCCGACC GCGTCGCCCG CACCGAGGCG TCGCGACGCT ATGCCAATGC CAGGCTGGCG GCGCTGCCGG TGACGCGTCA CCACTTCGAG CAGCATGAGC TGATGACGCT GGCCAGCGAG CGCGGTTCGA GCGAATATCT GGTGCTCTCG CATTACATGC CGGCCGAGGA CTGGACGGTG AACGTGCTGA TGGAGACGAG TTCCATCCGC GCCCAGGCAC GCACGGCGCT TGCTGCCGTG TTTCTCATTC TTTGCATTGC CGGGCTTACG GTGGCCGTCC TTCGCCAGCG GCGGGCGCGG CTTGCCGAGC GCATGCAGAT GCAGGCCGAG GCCCGCAACG AGCTGGAGCG GCGCGTCGAG GAGCGCACGG CCGATCTTGC CCGCGTCAAC AGCCGCATCG AAGAGGAGAT TGCCGAGCGG CGGCTGACCG AGCAACAACT CCGACAGACG CAGGCCGATC TGATCCAGGC GGGCAAGCTT GCCGGGCTGG GGCAGATGTC GGCTGCGCTT TCGCACGAAT TCAACCAGCC GCTCGCCGCC GCCAAGACCT ACACGGACAG CGCCTCCGTT CTCATCGACC GCGGTCGGAC GGAGGAGGCG CGGGACAATA TCCGGCGTAT CGGCGGGCTG ATCGACCGTA TGGCTGCGAT CAGCCGGCAC CTGCGCAACT TCGCCCGCAA GCCGAACGAG AAGCTCGGCC TCGTTTCCCT CGACGAGGCG ATGCGCGATA CGCTGGAGAT CGTCGCCTGG CGGTTGAAGG CGGCGGATGC CGAACTGCTG CTCGCTCTCG GCCCGCGTCC GCCGGTGGTG CGCGCCGGTT CGGTGCGTCT GCAGCAGGTG CTGGTGAACG TGATCTCGAA TGCGGCCGAT GCGGTGGAAG GGCTGGATGA TCGGCGCATC GAGGTTTCGG CCTTCGAGGA GGCCGGAAAG GTGGTGCTGA CGGTGCGGGA TCATGGACCG GGCGTGCCGG CGGCGATCGC CGAGCGTATC TTCGATCCGT TCTTCACGAC GAAGGGCGTC GGCAAGGGGC TCGGCCTCGG GCTTTCGATT TCCTACAACA TCATCAAGGA TTTCGGCGGC AGCCTGACTG CTGCCAATCA TCCCGAAGGA GGCGCGGTGT TCCGCATCGA GCTGCAATCG GCGGCAGGGC TGATGCCGGA GGCAGCGGAA TGA
|
Protein sequence | MLVVPLIIFS FFTYGSAIAT RAYMEEASAQ AGTALRLAVS ALSGHLNRYE ALPALIADHD DIKELVSAPE DVALRDAANL YLKEINGLLK SSDIYVVKPD GETIAASNYD GPASFVGQNF SYRPYFQDAI EGRQARFYAL GTTSLKRGYY FAAPIRTGAD IRGVIVFKVD IDMIESSWGG GEYRIFVSDP EGIIFMSGSP EWLYGAILPL TADRVARTEA SRRYANARLA ALPVTRHHFE QHELMTLASE RGSSEYLVLS HYMPAEDWTV NVLMETSSIR AQARTALAAV FLILCIAGLT VAVLRQRRAR LAERMQMQAE ARNELERRVE ERTADLARVN SRIEEEIAER RLTEQQLRQT QADLIQAGKL AGLGQMSAAL SHEFNQPLAA AKTYTDSASV LIDRGRTEEA RDNIRRIGGL IDRMAAISRH LRNFARKPNE KLGLVSLDEA MRDTLEIVAW RLKAADAELL LALGPRPPVV RAGSVRLQQV LVNVISNAAD AVEGLDDRRI EVSAFEEAGK VVLTVRDHGP GVPAAIAERI FDPFFTTKGV GKGLGLGLSI SYNIIKDFGG SLTAANHPEG GAVFRIELQS AAGLMPEAAE
|
| |