| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3456 |
|---|
| Symbol | |
|---|
| ID | 8014328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3487355 |
|---|
| End bp | 3488524 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644826020 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_002977241 |
|---|
| Protein GI | 241206145 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.960361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTC CCGCCCGGAT CAGCGACGAT CTGCCGTTTC TCACTGCCCT GCGCCGCGAC
CTGCACGCCT ATCCCGAACT CGGTTTCGAG GAGGAGCGCA CCGCCGGTAT CGTCGCGACG
CTTCTCGAAG AGGCTGGTAT TGCGGTGCAT CGCGGGCTTG GCGGCAGCGG CGTGGTCGGT
ACGCTGCAGA TCGGCAACGG CACGCGCAGG ATCGGGCTGC GCGCCGACAT GGATGCGCTC
GCCATGCCTG AAACGGCGGA GCGATCCTAT AAATCGACCG TGCCCGGAAA GATGCATGCC
TGCGGCCATG ACGGCCATAC GGCGATGCTG CTTGGCGCCG CGCGACATCT TGCGGCAACG
CGGGATTTTT CCGGCACGGT GCATTTCATC TTCCAGCCGG CCGAAGAAGG GCGAGGCGGA
GCAAGGCGCA TGGTCGAGGA GGGGCTGTTC ACGCTTTTTC CCTGCGATGC CGTCTACGGG
CTGCATAACA TGCCTGGGCT TGCGGTGGAT GAGATCGCCG TGGTCGAGGG ACCGCAGCTT
GCCTCCTCCG ACAGCTGGCG CATGACCTTC CGCGGGGCCG GCACGCATGG CGCCAAGCCG
CATCTCGGCC GCGATCCGAT CACAGCCGCC GGCACCTTCC TGTCATCGCT GCAGACGATC
GTCGGACGGG TGGTCGATCC GCTGCAGCCG GCCGTCGTCA GCGCCTGTTT CCTGCAGGCG
GGCGACCCGA AGGCTCTGAA CGTCATTCCT GACATCGTCG AGATCGGTGG CACGGCGCGG
GCCTATTCGC CCGATGTGCG CGACCAGTTG GAGACCGAGA TCGGACGATT GGCGCATGGC
ACGGCGGCCA TGTACAGTAT CGCTGTGGAC TATGCATTCG AACGGCGGAT TCCGCCTGTC
ATCAACGACG CGGATGCGAC CGCACGGGCG TTGGCAGTGG CCGGCTCGGT CTTCGGCGGG
AAGGTGCAGA CAAGCTTTCC GCCGTCGATG GCAGGCGACG ATTTTGCCTT CTTCGCCCAG
AATGCGCCGG GTTGCTACGT CTGGCTCGGC AACGGTCCGG CGGTGGATGG GGCGCTGCAT
CACAACACGG CCTATGACTT CAACGATGAA GCGCTTGGAT ATGGGGCGGC CTATTGGGTG
GCGTTGGTCG AGCGGGAGTT GAAGGTTTGA
|
|---|
| Protein sequence | MSIPARISDD LPFLTALRRD LHAYPELGFE EERTAGIVAT LLEEAGIAVH RGLGGSGVVG
TLQIGNGTRR IGLRADMDAL AMPETAERSY KSTVPGKMHA CGHDGHTAML LGAARHLAAT
RDFSGTVHFI FQPAEEGRGG ARRMVEEGLF TLFPCDAVYG LHNMPGLAVD EIAVVEGPQL
ASSDSWRMTF RGAGTHGAKP HLGRDPITAA GTFLSSLQTI VGRVVDPLQP AVVSACFLQA
GDPKALNVIP DIVEIGGTAR AYSPDVRDQL ETEIGRLAHG TAAMYSIAVD YAFERRIPPV
INDADATARA LAVAGSVFGG KVQTSFPPSM AGDDFAFFAQ NAPGCYVWLG NGPAVDGALH
HNTAYDFNDE ALGYGAAYWV ALVERELKV
|
|---|
| |