Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3422 |
Symbol | |
ID | 8014295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3444174 |
End bp | 3444908 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644825980 |
Product | GntR domain protein |
Protein accession | YP_002977207 |
Protein GI | 241206111 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.156381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGACC GCTCGACCAC CACAAGGCGC CCAAATTCTC CCCGCATGAC TGGGGCGAGT GTTCATGTGT CTTTGGCAGG CGAGATCGGT CTGCGAATCG TGCGCGGCGA CTATCCGCCG GGCACAATCC TGCCAAATGA GGCAAAATGG TCGGAAGTCT TTGACGTCAG CCGATCGGCG GTGCGCGAAG CGATCAAAAT GCTGATGGCC AAGGGCCTGC TTTCTTCCCG CCCGAAAATC GGCAGTTGGG TCGAACCCAA GGAACGTTGG AACCTGCTGG ATCGAGATGT CTTGGGCTGG TATGCGGCAT CTCCTGATCG CGAATCCTTT CTGAGGGCCG TGCAAGAACT CAGGCATATG ATCGAGCCGG AAGCGACTGC GCTTGCTGCG GAGCGCCGAA CTGACGAGCA GATGACCGCG ATCAGTCAGG CCCTGCACGA TATGGATCAG GCGACATCGC TCCAGCAGCG AACAGAATCC GATGCGCGAT TTCACATCGC GATCTTGCGC GCCTCGGGAA ATGATCTGTT GGTACCGCTC GGCGTATTGA TCGAATCGGC GCTGAACCAC CTCTTCGCCC ATGTAACGCG GGAGGAAGAC AACTTGCGGT ACGCGCTGAA ACTTCACGAA AATATTGAGA AAAACATTCG ACTGCAGCGG CCGAACATGG CGCGCAATGC AGTCCGCAAG GCGTTGGCAA ATACCGACGA CATCATAGCC CGGTGGTCGC GATAG
|
Protein sequence | MVDRSTTTRR PNSPRMTGAS VHVSLAGEIG LRIVRGDYPP GTILPNEAKW SEVFDVSRSA VREAIKMLMA KGLLSSRPKI GSWVEPKERW NLLDRDVLGW YAASPDRESF LRAVQELRHM IEPEATALAA ERRTDEQMTA ISQALHDMDQ ATSLQQRTES DARFHIAILR ASGNDLLVPL GVLIESALNH LFAHVTREED NLRYALKLHE NIEKNIRLQR PNMARNAVRK ALANTDDIIA RWSR
|
| |