Gene Rleg_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3399 
Symbol 
ID8014275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3416183 
End bp3417010 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID644825957 
Productglycoside hydrolase family 16 
Protein accessionYP_002977184 
Protein GI241206088 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.117609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTACG GGATATCTTC TAAGGCTCTG GGTTTGCTCA TCGTTCTCGG TCTGGGGGCG 
TTGCCCGGCC AGCCCAGCGT GGCTCAGCAA CCACTCAATA TCAATGCGTA TCAGCTAACG
TTCGAGGAGA GTTTCGACAG TCTCGACGTC TCGGCCTGGG GAGAGAGAAG CTCCCGCTGG
ATCGCCCATA CGCCCTGGAA CGGCGATTTC GGTGACGCCC GTTTCACCGA TCCGGCCCCC
GGCTTTCCGT TTACCACCGA TCAGGGAATT CTGAAGATCG AGGCGCGCAA GGAGGCCGAT
GGAACCTGGC GATCGGGCCT GTTGTCGTCG GTGAACCCGA AAGGCGAAGG GTTCTCGCAG
CAATTCGGTT ATTTCGAAGC ACGGATGAAG CTGCCGCCGG GCAAGGGAGT CTGGCCAGCC
TTCTGGCTCA TCGGGCTCGA TCGGTCGAAA TACACCGCCG AAATCGACGT CCTGGAATAT
TATGGGCGCG CGCCCTACGA ATTCAGCATG GGCTTCCATA TCTGGCGTCA GAGCCAGGGC
GGCCAGAACA CCACTGGTGG CCATTGGCAA ACCGTCCAGG ACGGAATTCT GAACAGCGAA
TATCATACCT ACGGCGTCGA TATCCAAGCT GACAAGACGA GCTTTTATCT CGACCGTCAG
TTCATCTGGA GCTTCGACAC GCCGAAGGAG TTCCACATGC CGTTCTATCC GCTGGTGAAC
CTGGCACTCG GCTCGGGTTG GCCGATCGAT GAAACGCCCA ATCCTTCCAT CCTGCTTGTC
GACTATATTC ACGTCTACCA GCGGAAGCCC ACCGACGCGG CAAATTGA
 
Protein sequence
MRYGISSKAL GLLIVLGLGA LPGQPSVAQQ PLNINAYQLT FEESFDSLDV SAWGERSSRW 
IAHTPWNGDF GDARFTDPAP GFPFTTDQGI LKIEARKEAD GTWRSGLLSS VNPKGEGFSQ
QFGYFEARMK LPPGKGVWPA FWLIGLDRSK YTAEIDVLEY YGRAPYEFSM GFHIWRQSQG
GQNTTGGHWQ TVQDGILNSE YHTYGVDIQA DKTSFYLDRQ FIWSFDTPKE FHMPFYPLVN
LALGSGWPID ETPNPSILLV DYIHVYQRKP TDAAN