| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3390 |
|---|
| Symbol | |
|---|
| ID | 8014267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3405739 |
|---|
| End bp | 3406623 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644825948 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002977175 |
|---|
| Protein GI | 241206079 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.890254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.172911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC GCGTCACTTT CTCCTCGACG ACGATCGGAC TGCTCTTCGC ATTTCCGATG
CTGTTGCTGA TCTTCGTCTT CTTCTACTGG CCGAGTGCGC AGGCGCTCTA TTGGGCGTTC
ACGCTCGAGC AGCCATGGGG CGGCGGTAAT GCCTGGGTCG GTTTCGACAA TTTCAGACAG
CTGCTCACCG ATCCTGTTTA TTGGGACTCG ATCACCCGCA GCATGATCTT CGGCTTCAGC
TCGACGGCCA TTGCCATGGG GCTGGCGCTG ATCCTGGCGC TTTTGACGGA TCGGGAGCTG
CGCGGCCACA AAGTCTATCG GTCAGTCTTC ATCTGGCCTT ATGCAATTGC CGCTCCCGCT
CTCGGCCTCG CCTTCCGCTT CATCCTGGCG CCGGAGGCCG GCCTTCTGTC GGTTATCAAC
CACGTCTGGC CCGGCCTCTG GAACCCCGCA CTCGACGGCA AGGACGCGAT GATCGCCGTC
ATTGTCGCCT TCTCCTGGAA ATATATCGGC TACAACTTCA TCTTCTTCCT CTCGGCGCTG
CAAGGCATTC CGCGCTCGCT GATCGAGGCC GCCGCAATGG ACGGTTCGGG ACCGATGCGC
CGTATCTGGG ATATCCAGCT GCCCCTGCTG ACGCCGACGC TGTTCTTCCT GCTCGTCATC
AACATCACCG AGAGCTTCCA GGATTCCTTC GGTATCGTCG ACATCATGAC GCAGGGCGGC
CCGGCGCGTG CCACCGAGCT CATGGTCTAC AAGATCTATT TCGACGGCTT CAGAGGTCTC
GACTATTCGG GCGCCGCAGC GCAGTCCATC ATCCTGATGG TGCTGGTTGT CCTACTCACC
ATCTTCCAGT TCCGCTTCAT CGAGCGGCGG GTGCACTACA AGTGA
|
|---|
| Protein sequence | MEKRVTFSST TIGLLFAFPM LLLIFVFFYW PSAQALYWAF TLEQPWGGGN AWVGFDNFRQ
LLTDPVYWDS ITRSMIFGFS STAIAMGLAL ILALLTDREL RGHKVYRSVF IWPYAIAAPA
LGLAFRFILA PEAGLLSVIN HVWPGLWNPA LDGKDAMIAV IVAFSWKYIG YNFIFFLSAL
QGIPRSLIEA AAMDGSGPMR RIWDIQLPLL TPTLFFLLVI NITESFQDSF GIVDIMTQGG
PARATELMVY KIYFDGFRGL DYSGAAAQSI ILMVLVVLLT IFQFRFIERR VHYK
|
|---|
| |