| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3388 |
|---|
| Symbol | ugpC |
|---|
| ID | 8014265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3403692 |
|---|
| End bp | 3404801 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644825946 |
|---|
| Product | glycerol-3-phosphate transporter ATP-binding subunit |
|---|
| Protein accession | YP_002977173 |
|---|
| Protein GI | 241206077 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.745344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.270179 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCACCGA TCTCCATTCG TGGCGTGAAG AAAAACTACG GCAAGACCCC CGTCGTTCAC
GGCGTCGATC TCGACATCCA GTCGGGCGAG TTCATCGTCA TCCTCGGCCC ATCCGGCTGC
GGCAAGTCCA CGCTGCTGCG CATGATCGCC GGCCTCGAGG AAATCACCGG TGGTGAAATC
GCCATTGACG GCCGCGTCGT CAACCAGCTG GAGCCGCGCG AGCGCGGCTG TGCCATGGTG
TTCCAGAACT ATGCGCTTTA TCCGCATATG AGCGTTGCCG AGAATATCGG CTACGCATTG
AAGGTGGCCG GTGTCTCGAA GGCAGAGCGG AGCCGGCGCA TCGGCGAGGT CGCCAAGGCG
CTCAGCCTCG AACCCTTCCT CGAACGCCGG CCGGCCGCTC TTTCCGGCGG TCAGCGCCAG
CGCGTCGCCA TGGGCCGGGC GATGATTCGC GAGCCGAAGG TGTTTCTCTT CGACGAACCG
CTGTCGAACC TTGACGCCAA GCTGCGCATT GCCATGCGCG CTGAAATCCG CCGCCTGCAC
CGCCGCCTCG GGGCCACTTC GATCTTCGTC ACGCATGACC AGACCGAGGC GATGACGCTG
GCCGATCGGC TGGTGGTAAT GAACGGCGGC AGGGTGGAGC AGGTCGGCAC GCCCGAAGAG
GTCTATCATC ATCCGGTCTC GCGCTTCGTT GCGGGCTTCG TCGGCACGCC GGCGATGAAC
CTGCTCGAGG GCACGATCAA TGACGAGGGC GTCTTCGTCT ACGATCAGAG CCGCATGGTG
GCGCTGCCAC GCGAGCGCGC CGCACCGCTG AAAGGCAAAC GCGTCGTGCT CGGCATGCGT
GCTGAGGCCG CCCGGCTGGT GGCCCCGGAT GCGCCAGGCG CCTTGGTAGC AACGACCGAT
TTCATCGAAG AGCTCGGCGC AAGCCGCATC GTCCACGCCG ATTTCGACGG GCTACCCTTT
GCCGTGGCGC TGACTGAGGC CGTGAAGGTG AAGTCGGGCG ATCCGATCGG CATCGCGATC
GATTACGACC AGATCCACCT CTATGCCGCC GATACCGGCC GGATCATCGA GAAGCCTGTT
ATGAACAGCG CAGGCGTCGT CCACGCCTAA
|
|---|
| Protein sequence | MAPISIRGVK KNYGKTPVVH GVDLDIQSGE FIVILGPSGC GKSTLLRMIA GLEEITGGEI
AIDGRVVNQL EPRERGCAMV FQNYALYPHM SVAENIGYAL KVAGVSKAER SRRIGEVAKA
LSLEPFLERR PAALSGGQRQ RVAMGRAMIR EPKVFLFDEP LSNLDAKLRI AMRAEIRRLH
RRLGATSIFV THDQTEAMTL ADRLVVMNGG RVEQVGTPEE VYHHPVSRFV AGFVGTPAMN
LLEGTINDEG VFVYDQSRMV ALPRERAAPL KGKRVVLGMR AEAARLVAPD APGALVATTD
FIEELGASRI VHADFDGLPF AVALTEAVKV KSGDPIGIAI DYDQIHLYAA DTGRIIEKPV
MNSAGVVHA
|
|---|
| |